Pairwise Alignments

Query, 352 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  176 bits (445), Expect = 1e-48
 Identities = 120/358 (33%), Positives = 180/358 (50%), Gaps = 39/358 (10%)

Query: 1   MTAYILRRLLLIIPTLLAILLVNFAIVQAAPGGPVEQAVARLQGLGGGAPGARAEVVHGE 60
           M  +I  +LL ++PT L I +V FA V+  PG PV                    ++ GE
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVL-------------------LMAGE 41

Query: 61  SRATRGLDPKLIEEIKRQYGFDKSAPERLWLMLGQYARLDFGNSFFRGAKVTDLILDKLP 120
               RG+ P+   ++  Q GF +   E+    LG+  + D GNS      V    L   P
Sbjct: 42  ----RGISPERHAQLAEQLGFAQPIWEQYLHFLGRLLQGDLGNSLVTKKPVLTEFLALFP 97

Query: 121 VTLSLGFWATLITYLVSIPLGIRKAMRHGSRFDAWSSALIVIGYALPSFLFALLLIVLFA 180
            T+ LG  A +I  ++ +P+G+  A+R GS FD  S    ++G+++P F + LLLI++F+
Sbjct: 98  ATVELGLVAIIIATVIGVPVGVIAAIRRGSWFDQISMTTALVGFSMPIFWWGLLLIIMFS 157

Query: 181 GGTSLNWFPVRGLVSDNF-----------DEL--SLLGKVADYFWHLVLPVAALVIGGFA 227
           G   L W PV G +S  +           D L     G  A    HL+LP   L     A
Sbjct: 158 G--ILQWTPVSGRISLMYFFPSVTGFMLIDSLISGQKGAFASALSHLILPSVVLATIPLA 215

Query: 228 TLTLLTKNAFLDEVSRQYVVTARAKGLSERRVLYGHVLRNAMLLVVAGLPQALITVFFAG 287
            +   T++A L+ +   YV TARAKG+S  RV+  H LRNAM+ V+  +    I V  AG
Sbjct: 216 VIARQTRSAMLEVLGEDYVRTARAKGMSASRVVGIHALRNAMIPVITTI-GLQIGVLMAG 274

Query: 288 SLLIEVIFSLDGLGRMSYEAAVSRDYPVVFGTLFIFTLAGLLIRLIGDLSYTLLDPRI 345
           ++L E IFS  G+G+   ++   RDYPVV   L +     +++ L+ DL+Y L++PRI
Sbjct: 275 AILTETIFSWPGIGKWMIDSISRRDYPVVQSGLLLIAGLVMVVNLLVDLTYGLINPRI 332