Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 326 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  134 bits (336), Expect = 4e-36
 Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 8/249 (3%)

Query: 93  LFAPIPFSADTPNYDLQVPTPSPPS--ASNWLGTDDQGRDVLARVLYGTRVSLLFAFALT 150
           L AP+ +  D    D+  P    P   A+  LG+D  GRDV+A + +G RVSL       
Sbjct: 78  LLAPLLYPGDP--LDMVAPPLLWPGQDAAYPLGSDSLGRDVIAGIAHGARVSLAVGVVAA 135

Query: 151 VVSVLIGVAAGALQGYHGGWVDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMA 210
           V+S++IGV  GA  GY GG +D    R+ E++  +P    +I++    +P    ++  + 
Sbjct: 136 VLSLVIGVLVGATAGYFGGRIDDVLVRITELFQTMPSFLFVIVVVAIGQPSVPVIVCAIG 195

Query: 211 LFSWLTLVDVVRAEFLRGRNLEYVKAARALGLPDSQVMLRHILPNAMNATLTYVPFMLTG 270
           L SW  +  +VRAEF   R  E+V AAR+ G   ++++ + +LPNA+   +     ++  
Sbjct: 196 LASWPVIARLVRAEFRALRETEFVLAARSQGFSHARIIFQEMLPNALPPVIVTTSVLVAS 255

Query: 271 AITTLTALDFLGFGMPAGSASLGELVTQGKQHLEAPWLGFTAFFALAVILSLLV--FIGD 328
           AI   +AL FLG G P  + S G ++ QG++ L   W   TA    A++L++L    +GD
Sbjct: 256 AILIESALSFLGMGDP-NAVSWGSMIGQGRELLRTAWY-LTALPGAAIVLTVLALNLVGD 313

Query: 329 ALREAFDPR 337
            L +AF+PR
Sbjct: 314 GLNDAFNPR 322