Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 2e-35
 Identities = 77/229 (33%), Positives = 121/229 (52%), Gaps = 4/229 (1%)

Query: 111 PTPSPPSASNWLGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGW 170
           P   P S   WLG+D  GRDVL  ++YG R +LL      ++SVLIG+  GA  GY+GG 
Sbjct: 73  PLTPPFSEDAWLGSDYLGRDVLTALIYGGRATLLVGAVAALLSVLIGITLGAFAGYYGGK 132

Query: 171 VDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRN 230
           +D    +L E +  LP L   +++     P    +   + + SW     + RAEF++ R 
Sbjct: 133 IDAALMKLTEFFQVLPALLFAMVVVTLFSPTLVTVTLAIGIVSWTGTARLTRAEFMKYRG 192

Query: 231 LEYVKAARALGLPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPAGSA 290
           LE+V+A RA+G  D++++ + ILPNA+   +      +  AI     L FLG G P    
Sbjct: 193 LEFVRAERAIGAGDARIIWKVILPNALPPLVVSATLAIGAAILFEAGLSFLGLGDP-NQM 251

Query: 291 SLGELVTQGKQHLEAPWLGFTAFFALAVILSLLV--FIGDALREAFDPR 337
           S G ++   +Q++ + W    AF   A+ +++L    IGD L +A +P+
Sbjct: 252 SWGLMIGSSRQYVLSCWWA-VAFPGAAIFITVLAVSLIGDGLNDALNPK 299