Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  149 bits (377), Expect = 7e-41
 Identities = 86/232 (37%), Positives = 126/232 (54%), Gaps = 11/232 (4%)

Query: 117 SASNWLGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGWVDLFGQ 176
           S+   LGTDDQGRD+L+ V+YG R+SL+      V+SV++GV  G L G+ GGW+D F  
Sbjct: 70  SSKYLLGTDDQGRDILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDSFLM 129

Query: 177 RLLEVWSGLPVLYLLIILSGFVEP---------DFWWLLGIMALFSWLTLVDVVRAEFLR 227
           R+ +V    P + + ++++G              F  L+  ++L  W+     VR   L 
Sbjct: 130 RVCDVMLSFPPILVALLIAGVGRALFPGAHESLAFGVLIVSISLTGWVQYARTVRGSTLV 189

Query: 228 GRNLEYVKAARALGLPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPA 287
            RN EYV+AAR  G+   ++MLRH+LPN +          +  AI T   L FLG G+P 
Sbjct: 190 ERNKEYVQAARVTGVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGVGVPP 249

Query: 288 GSASLGELVTQGKQHLEAPWLGFTAFFALAVILSLLV--FIGDALREAFDPR 337
            S SLG L++ G Q+L +     T F  L ++L  L    +GD LR+A +PR
Sbjct: 250 TSPSLGTLISIGNQYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPR 301