Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 346 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  345 bits (885), Expect = e-99
 Identities = 169/337 (50%), Positives = 236/337 (70%), Gaps = 1/337 (0%)

Query: 2   LSPLSRRRLQRFRRHRLGWVSLWLFAGLLLLSLCAELVANDKPLLLGYKGNVYVPALKRY 61
           +SP  RR   RF+R+RLG+ SL +F  +++LSL AE+++ DKPL+L Y+G  Y P L+ Y
Sbjct: 8   ISP-GRRAWLRFKRNRLGFWSLVIFTVMVVLSLFAEVLSTDKPLVLRYEGRTYFPVLRDY 66

Query: 62  TEQQFGGQLPFQPDYRSAYVRQLIAEQGGWMLFAPIPFSADTPNYDLQVPTPSPPSASNW 121
           +E+ FGG      DY   Y+R  I +   W ++AP P+   T NY  + P+P+ P+A N 
Sbjct: 67  SEKTFGGDFETPADYLDPYIRDRITQGDNWAIYAPNPYGPKTLNYFAKAPSPAAPTADNI 126

Query: 122 LGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGWVDLFGQRLLEV 181
            GTDD+GRD+LA+++YG RVS+LF  ALT +  ++GVAAGA+QGY  G VDL  QR +E+
Sbjct: 127 FGTDDRGRDLLAQLIYGFRVSVLFGLALTAIGTVLGVAAGAVQGYFAGKVDLAFQRFIEI 186

Query: 182 WSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAARALG 241
           WS +P LYLLII S    P    LL +++LF W+ L D VRAEFLR R ++YV+AARALG
Sbjct: 187 WSSMPELYLLIIFSAIFAPSVALLLILLSLFGWMGLADYVRAEFLRNRQMDYVRAARALG 246

Query: 242 LPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPAGSASLGELVTQGKQ 301
           + + Q+M RHILPN+M   +T++PF ++ AI  LT+LDFLG G+P G+ SLGEL++QGK 
Sbjct: 247 VSNLQIMWRHILPNSMVPVVTFLPFRMSAAILALTSLDFLGLGVPPGTPSLGELLSQGKA 306

Query: 302 HLEAPWLGFTAFFALAVILSLLVFIGDALREAFDPRR 338
           +++A W+  + F  L V L LL F+GDALR+A DPR+
Sbjct: 307 NIDAWWISISTFGVLVVTLMLLTFMGDALRDALDPRK 343