Pairwise Alignments

Query, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

Subject, 381 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  385 bits (989), Expect = e-112
 Identities = 188/360 (52%), Positives = 254/360 (70%), Gaps = 26/360 (7%)

Query: 3   SPLSRRRLQRFRRHRLGWVSLWLFAGLLLLSLCAELVANDKPLLLGYKGNVYVPALKRYT 62
           SP ++RR Q F+ +R G+ S WLF  L  LSL AE +ANDKP+L  YKG + VP +  Y 
Sbjct: 21  SPTTKRRWQNFKANRRGYWSFWLFLILFFLSLIAEFIANDKPILASYKGEILVPVMVDYP 80

Query: 63  EQQFGGQLPFQPDYRSAYVRQLIAEQGGWMLFAPIPFSADTPNYDLQVPTPSPP------ 116
           E++FGG L  Q DY+S++++  I    GWM++ PI +S  T N ++    P+ P      
Sbjct: 81  EEKFGGFLA-QTDYKSSFIQDEI-NANGWMIWPPIRYSYQTVNSNIPHSAPTAPFWLMDE 138

Query: 117 ------------------SASNWLGTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGV 158
                                NWLGTD+Q RDV AR++YG R+S+LF   LT+ S L+GV
Sbjct: 139 KERCSAYPQGNADPGCTLGNLNWLGTDNQARDVTARMIYGFRISVLFGLTLTIASALVGV 198

Query: 159 AAGALQGYHGGWVDLFGQRLLEVWSGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLV 218
            AGA+QGY GGW DL  QR +E+WS +PVLY+L+I++  + P F+ LLGIM LFSW+  V
Sbjct: 199 TAGAIQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILPPGFFVLLGIMLLFSWVGFV 258

Query: 219 DVVRAEFLRGRNLEYVKAARALGLPDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTAL 278
            +VRAEFLR RN EYV+AARALG+ +  +M RH+LPNAM ATLT++PF+L+G+ITTLT+L
Sbjct: 259 GIVRAEFLRARNFEYVRAARALGVGNWTIMFRHLLPNAMVATLTFLPFILSGSITTLTSL 318

Query: 279 DFLGFGMPAGSASLGELVTQGKQHLEAPWLGFTAFFALAVILSLLVFIGDALREAFDPRR 338
           DFLGFGMP GS SLGE++ QGK +L+APWLG TAFF ++++LSLL+F+G+A+R+AFDPR+
Sbjct: 319 DFLGFGMPPGSPSLGEMIAQGKNNLQAPWLGLTAFFTMSIMLSLLIFVGEAVRDAFDPRK 378