Pairwise Alignments

Query, 481 a.a., putative transcriptional regulator from Pseudomonas putida KT2440

Subject, 469 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  645 bits (1664), Expect = 0.0
 Identities = 340/465 (73%), Positives = 386/465 (83%), Gaps = 5/465 (1%)

Query: 22  MHDSDSLKDYPQVRQLAIRSLFEIIEQSSEGTVIVDRQARIVWMNERYARRFGLADAASA 81
           M+ +D+LKDY QVR LAI+SLFEIIEQSSEGTVIVDR A IVWMNERYA+RFGL  A  A
Sbjct: 1   MNITDNLKDYQQVRGLAIQSLFEIIEQSSEGTVIVDRDANIVWMNERYAKRFGLKSADEA 60

Query: 82  IGQPCETVIPGSLMRDVVSNGRPILLDMLDTPNEPLVVMRLPIHDDQGALIGAIGFALFD 141
           IGQPCE VI  SL+R VV N +PILLD+ DTP  PLVVMRLPIH++ GA+IGAIGFALFD
Sbjct: 61  IGQPCEQVISNSLLRQVVRNDQPILLDIQDTPKGPLVVMRLPIHNEAGAVIGAIGFALFD 120

Query: 142 ELRSLSPLLKRYASMQQELASTRSQLRARQAKYSFAQFVGSSAPSLEAKRRARRGAGSDS 201
           ELR+LSPL++RY SMQQELASTRS LR+RQ+KY+FA F+G+SA SLE KRRARR A ++S
Sbjct: 121 ELRNLSPLIERYLSMQQELASTRSLLRSRQSKYNFAHFIGTSAASLEVKRRARRSASAES 180

Query: 202 PVLLLGETGTGKELLAHAIHAASARAHRAFVSINSAAIPETLLEAEFFGTAPGAFTGADR 261
           PVLLLGETGTGKELLA AIH AS+RAH+AFVSINSAAIP  LLEAEFFGTAPGAFTGADR
Sbjct: 181 PVLLLGETGTGKELLAQAIHGASSRAHKAFVSINSAAIPADLLEAEFFGTAPGAFTGADR 240

Query: 262 KGRSGKLQLAEGGTLFLDEIGDMPLALQSKLLRVLQEKEYEPVGSNQMLRSDVRIIAATS 321
           KGR GK Q+A+GGTLFLDEIGDMPL LQSKLLRVLQEKE+EPVGSN+ML SDVR+IAATS
Sbjct: 241 KGRPGKFQIAQGGTLFLDEIGDMPLPLQSKLLRVLQEKEFEPVGSNEMLHSDVRVIAATS 300

Query: 322 IDLQAAMARGAFRADLYYRLNVLPIDVPPLRQRLEDLPALCEAILAELGSQYELEAEAQQ 381
           +DL+AA+ RG FRADLYYRLNVLPI VPPLR+RLED+PAL EAIL EL SQ+EL+ EA  
Sbjct: 301 MDLEAAIKRGEFRADLYYRLNVLPIQVPPLRERLEDIPALSEAILEELRSQHELDREALA 360

Query: 382 LLARHAWPGNIRELRNVLERATLLADQPRLGVADLRAALGPLSPLAEAPV-----RQSYR 436
           LLA+HAWPGNIRELRNVLERA LL+D   L   ++RAA+G  +P+  A        +S+ 
Sbjct: 361 LLAQHAWPGNIRELRNVLERAALLSDDLVLDAREIRAAIGTFTPVERASAVAAVEGESFS 420

Query: 437 EACEAFERGLIAGALAEQGGKVPEAAAALGLGRSTLYKKMAALGL 481
            A E F+R +I  AL    G V EAA  LGLGRSTLYKKM AL L
Sbjct: 421 AARERFDRQVIGAALRACEGNVIEAANRLGLGRSTLYKKMVALDL 465