Pairwise Alignments

Query, 1089 a.a., putative Pyocin R2_PP, tail length determination protein from Pseudomonas putida KT2440

Subject, 818 a.a., phage tail tape measure protein from Pectobacterium carotovorum WPP14

 Score =  100 bits (249), Expect = 4e-25
 Identities = 97/458 (21%), Positives = 199/458 (43%), Gaps = 28/458 (6%)

Query: 69  DKLLRKLDSNLDSLRKQGIEVGKLGREYQRLGREARAADLQLKGHQQLQAGKESLKSNIG 128
           +K L +L++N + LR+         +E     R   A D + K  Q            + 
Sbjct: 66  NKSLHELETNQERLRRNKPSKETPSKETSGKSRGELADDFKTKREQF---------GFVM 116

Query: 129 RAVVATGAAAVPTMISANYQAIIRDIAIKADIANKPEEQQLTRTVIGTAKDTGMSRNDVA 188
           + VVA+          A+++A +R I+I  DI+++ +E+ + + +  +++    +   + 
Sbjct: 117 KPVVAS------VTHYASFEAQLRGISIAHDISSE-QEKLMGQRLRQSSQQVNQTPEALL 169

Query: 189 DLVNQLVGAGMDLDKALSYAPVAAKFAVGQGASGVDTASMIQALEQNAKISDPKVMQQAL 248
               +L+  GM   +A   A V  K +   GA+  D  ++   L+    +   +V Q++L
Sbjct: 170 SSAGKLLDNGMSQQQATDLAAVLGKTSTASGAALTDLTALSVTLDNVFNLKGAEVQQESL 229

Query: 249 EAIAYQGQAGSFEASDMAKWFPQLLAGMEKNGITGLDAVTSLGSMLQVQMKTAGSSDEAA 308
             +   G    F A+ M+++ P L +G    G TG  A++ L S L    K A +    A
Sbjct: 230 SRML-AGTKQGFSAALMSQYVPALASGFTAMGATGNQALSQLVSSLSAT-KGADTEANTA 287

Query: 309 NNFKNWMEKIGAGDIKKAYSDVGIDYQASLNTGLQKGMNVIEASMALAMRYVEKTDPAKA 368
               ++M  +G  DI  +Y   G++Y A L + ++ G +  +A++ +  + ++    +K 
Sbjct: 288 ARLGSFMNAVGRTDIADSYGKAGLNYNALLKSHMKDGYSQYDAAVLIGNQLID----SKG 343

Query: 369 KQIKDAQAKIDKEVDPEKAKAALEALEKTLRTGD-IFADMQVKAALTAYGQNRGLYEELK 427
            Q +         VD +++      LE+  RT + +   M +K    +Y  N+ +     
Sbjct: 344 SQFQKRWDMAAGNVDAQQSLMQRYGLEEVFRTPEAVNHAMSMKQNWQSYQANQQVM---- 399

Query: 428 ADSKKASGILDKNLAERRETSAQQWAELGQAVDDSMRSIGDAIRPATDMAAQGLTKVAHG 487
            +S  A+  LD + A + +T   +W  +  ++ +   ++G+A+ P     +  L  +   
Sbjct: 400 -NSPAATQTLDLDFARQNDTLTARWNRMTTSLLNIALNVGEALMPVLVSLSDALLPILDQ 458

Query: 488 ITSLSDQFPSIAMGIGGITAAVIAFLSARSALRVGRGV 525
           + + +   P +  GI    A   AF  A S  ++G  +
Sbjct: 459 LVTWTAANPELVRGIVMAVAGFFAFRMALSGAKLGMDI 496