Pairwise Alignments

Query, 1089 a.a., putative Pyocin R2_PP, tail length determination protein from Pseudomonas putida KT2440

Subject, 623 a.a., phage tail tape measure protein from Erwinia tracheiphila SCR3

 Score = 92.0 bits (227), Expect = 1e-22
 Identities = 131/563 (23%), Positives = 223/563 (39%), Gaps = 66/563 (11%)

Query: 33  LEAKGNKAKVLKSTIGETIK-LREEWKRAHDSGAAG-------ADKLLRKLDSN----LD 80
           L AK + +KVL++ + E  K +R+  K    SG AG        D+  R  ++     + 
Sbjct: 11  LTAKDSGSKVLRAAMQEASKQVRQLEKDQQKSGEAGIRASKALTDEYRRSSEARSVLGIR 70

Query: 81  SLRKQGIEVGKLGREYQRLGR--------EARAAD------LQLKGHQQLQAGKESLKSN 126
           S R+   E+ +    Y RL R        +ARA D       QL+G     +   S  S 
Sbjct: 71  SERQIQREIQQTTAAYNRLTRTGVMSASEQARAFDSMRQRVTQLRGELTRTSETMSRMSK 130

Query: 127 ----------IGRAVVATGAA-AVPTMISANYQAIIRDIAIKADIANKPEEQ-----QLT 170
                     +G  + A GA  A P      Y   +  IA  A     PE++     QL 
Sbjct: 131 ARVLGGNIMALGGGIAAAGAVLAQPAREQMTYSQRLAGIANTAYNQLPPEQRIAAKAQLG 190

Query: 171 RTVIGTAKDTGMSRNDVADLVNQLVG-AGMDLDKALSYAPVAAKFAVGQGASGVDTASMI 229
             + G  +  G + +  A+ +  L+   G+D   A+S        +    ++  + A + 
Sbjct: 191 DAIKGAVRKGGGTADTAANALGVLMSKGGVDDKTAMSVLGDVMYTSTATNSNPEEIAQLT 250

Query: 230 QALEQNAKISDPKVMQQALEAIAYQGQAGSFEASDMAKWFPQLLAGMEKNGITGLDAVTS 289
                N KI   + +    + +   G+ G FE +DMAK  P ++    K G+ GL  +  
Sbjct: 251 VTALNNFKIKKEE-LPLFFDKLTRSGELGGFELTDMAKELPTIMTNYSKLGMGGLKDLDL 309

Query: 290 LGSMLQVQMKTAGSSDEAANNFKNWMEKIGAGDIKKAYSD--------VGIDYQASLNTG 341
           L   LQ    T+G++D AANNF N + K+ + D   +  +          + Y   L + 
Sbjct: 310 LLGNLQANSATSGNNDTAANNFNNLLLKVTSADTMNSMKNRLFRVDGQKPVSYADYLVSQ 369

Query: 342 LQKGMNVIEASMALAMRYVEKTDPAKAKQIKDAQAK--IDKEVDPEKAKAALEALEKTLR 399
             KG N  E S   A+     +D    K   D +      KE D    +AA + L  ++ 
Sbjct: 370 RSKGKNTYE-SFVNAIDATVTSDKGYKKLTSDIEKNKGTKKEGD---LRAARDVLASSI- 424

Query: 400 TGDIFADMQVKAALTAYGQNRGLYEELKADSKKASGILDKNLAERRETSAQQWAELGQAV 459
              I  D Q + ALT     +   +E  A + KA+G +  +    +  +++   +L Q  
Sbjct: 425 IASIIPDQQAQLALTTAFLKKDYIKEQVAGTNKANGAVSSSF---QVVASESDYKLNQLA 481

Query: 460 DDSMRSIGDAIRPATDMAAQGLTKVAHGITSLSDQFPSIAMGIGGITAAVIAFLSARSAL 519
           ++   + G+          + L   A  I   + ++P +++ + G T  ++A  +A    
Sbjct: 482 NEKFFADGEVFGGFN----KNLGDAASAIAEYAKKYPMLSVAVEGATKGIVAMTAAAYVF 537

Query: 520 RVGRGVFNIAMGRGLEGFAGRAG 542
              R   N  +   + G AG AG
Sbjct: 538 AGIRMFQNGGIAASIPGAAGAAG 560