Pairwise Alignments

Query, 331 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 340 a.a., minor capsid protein E from Magnetospirillum magneticum AMB-1

 Score =  154 bits (389), Expect = 3e-42
 Identities = 104/335 (31%), Positives = 162/335 (48%), Gaps = 8/335 (2%)

Query: 2   ADIDIFEDNAFTVPALTAAINEQPFVPGRLAELGLFEEEGVTTLTVQVEKDGETLALVPS 61
           A I+ F+   +++  +T AIN  P +  RL ++GLF  EGVT  +V +E+    L L+P+
Sbjct: 3   AIINPFDAGGYSLAEMTQAINLLPNLYTRLGQMGLFRFEGVTQRSVIIEQAEGVLNLLPT 62

Query: 62  GERGTSGLAVNGSKRILLPFNTVHLPERFAIKADEIQGIRAFGEQTELQAVQDVVNKRLA 121
              G      N   R +  F    +P   +I   ++QG+R FG       +  V+ ++L 
Sbjct: 63  VPLGGPATVANRDARSMRSFTVPWIPHDDSITPQDVQGVRGFGVADAADPLATVMERKLT 122

Query: 122 KARRQLDATHEFHRMGALNGVVLDADGSTVLLNIYDRFGLQPIEIEMELGTAGTDVRVKC 181
           + R +   T EF  + AL GVV D  GST L + +  FGL   +++  LGTA T+V+ K 
Sbjct: 123 RMRSKHAQTREFMEVNALKGVVRDGGGST-LYDYFSEFGLARQQVDFALGTATTNVQAKI 181

Query: 182 VDALDAQEEALGATTSNGARAFCGKNFWRALISHQSVKKTYE--GTQYAAALRADGRETF 239
            D L   E  L   T     A     F+  LI H  V++ Y+   +  A  LR D R  F
Sbjct: 182 RDVLRKVETELKGETMTSVLALVSPEFFDKLIGHAKVEQAYQYYSSTGAQPLREDVRRRF 241

Query: 240 EFGGITWERYRGKVS-----GISFVPDDEARLVPEGVPGLCITRFAPADYMDTVNTEGLP 294
            F G+ +E Y   V+       + +P  E    P G     +T  APA+ ++TVNT G+P
Sbjct: 242 PFAGMVFEEYSATVTLSTGQTETLIPAGEGIAFPLGTMDTFVTYGAPANLIETVNTLGVP 301

Query: 295 YYSQLEMMPFKKGVDGEAQSNPLHLVTRPRAIIRL 329
            Y++         +D + +++ L +  RPR  +RL
Sbjct: 302 MYARQLARQDGSAIDVKTEASILPVNKRPRLAVRL 336