Pairwise Alignments

Query, 331 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 340 a.a., minor capsid protein E from Magnetospirillum magneticum AMB-1

 Score =  154 bits (388), Expect = 4e-42
 Identities = 103/333 (30%), Positives = 161/333 (48%), Gaps = 8/333 (2%)

Query: 4   IDIFEDNAFTVPALTAAINEQPFVPGRLAELGLFEEEGVTTLTVQVEKDGETLALVPSGE 63
           I+ F+   +++  +T AIN  P +  RL ++GLF  EGVT  +V +E+    L L+P+  
Sbjct: 5   INPFDVGGYSLAEMTQAINILPNLYTRLGQMGLFRFEGVTQRSVIIEQAEGVLNLLPTVP 64

Query: 64  RGTSGLAVNGSKRILLPFNTVHLPERFAIKADEIQGIRAFGEQTELQAVQDVVNKRLAKA 123
            G      N   R +  F    +P   +I   ++QG+R FG       +  V+ ++L + 
Sbjct: 65  LGGPATVANRDARSMRSFTVPWIPHDDSITPQDVQGVRGFGVADAADPLATVMERKLTRM 124

Query: 124 RRQLDATHEFHRMGALNGVVLDADGSTVLLNIYDRFGLQPIEIEMELGTAGTDVRVKCVD 183
           R +   T EF  + AL GVV D  GST L + +  FGL   +++  LGTA T+V+ K  D
Sbjct: 125 RSKHAQTREFMEVNALKGVVRDGGGST-LYDYFSEFGLARQQVDFALGTATTNVQAKIRD 183

Query: 184 ALDAQEEALGATTSNGARAFCGKNFWRALISHQSVKKTYE--GTQYAAALRADGRETFEF 241
            L   E  L   T     A     F+  LI H  V++ Y+   +  A  LR D R  F F
Sbjct: 184 VLRKVETELKGETMTSVLALVSPEFFDKLIGHAKVEQAYQYYSSTGAQPLREDVRRRFPF 243

Query: 242 GGITWERYRGKVS-----GISFVPDDEARLVPEGVPGLCITRFAPADYMDTVNTEGLPYY 296
            G+ +E Y   V+       + +P  E    P G     +T  APA+ ++TVNT G+P Y
Sbjct: 244 AGMVFEEYSATVTLSTGQTETLIPPGEGIAFPLGTMDTFVTYGAPANLIETVNTLGVPMY 303

Query: 297 SQLEMMPFKKGVDGEAQSNPLHLVTRPRAIIRL 329
           ++         +D + +++ L +  RPR  +RL
Sbjct: 304 ARQLARQDGSAIDVKTEASILPVNKRPRLAVRL 336