Pairwise Alignments

Query, 272 a.a., shikimate dehydrogenase-related enzyme from Pseudomonas putida KT2440

Subject, 289 a.a., shikimate 5-dehydrogenase from Agrobacterium fabrum C58

 Score = 77.4 bits (189), Expect = 3e-19
 Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 28/283 (9%)

Query: 4   RYAVIGRPINHTKSPLIH-------GL-----FAQASNQQLEYGAIEGSLDDFEAQVLQF 51
           +  +IG  I  +KSP +H       GL         + ++L   ++   LD+ EA+    
Sbjct: 8   KVGLIGADIQLSKSPALHMREGAAHGLDYSYELVDVTARKLPQSSLPALLDELEAR---- 63

Query: 52  RSEGGKGMNITAPFKLRAFELADRRSERAQLARAANALKFEDGRIVAENFDGIGLLRDIE 111
              G  G NIT PFK          S+ A++  A N + F DGR +  N D  G      
Sbjct: 64  ---GFAGTNITHPFKQAVIPHLHELSDDARMLGAVNTVVFRDGRRIGHNTDWYGFYESFV 120

Query: 112 ENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRI 171
             L +  R+ R LL+GAGGA        L+     L I +RD  +A  L +EL ++R   
Sbjct: 121 RGLPDAKRD-RALLVGAGGAGVAVAHAALKLDIIRLDIFDRDFPRAERLADEL-NARFGE 178

Query: 172 SRYEALEGQS-----FDIVVNATSASLTADL-PPLPADVLGEAALAYELAYGKGLTPFLR 225
            R  A++  +      D +++AT   + A    P+ A+++ +     ++ Y   +T  L 
Sbjct: 179 GRAFAVKDPADSLPFADGLIHATPMGMPAHPGMPVAAELIEQKHWVADIVYMPLVTELLA 238

Query: 226 LAREQGQARLADGVGMLVEQAAEAFAWWRGVRPDTRAVINQLT 268
            A  +G  R   G GM V QA  AF  + G  PD + +    T
Sbjct: 239 TAASKG-CRTLPGGGMTVFQAVGAFRLFCGREPDAKRMTAHFT 280