Pairwise Alignments

Query, 299 a.a., CnmA from Pseudomonas putida KT2440

Subject, 303 a.a., PCP degradation transcriptional activation protein from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 4e-39
 Identities = 100/287 (34%), Positives = 146/287 (50%), Gaps = 8/287 (2%)

Query: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71
           LL   + L   R+VTRAA +L  SQP +S  LARLR+  +DPL V    GM PT +A +L
Sbjct: 10  LLVTLEALLAERNVTRAAARLHLSQPAVSAQLARLRDLFDDPLLVPARRGMTPTVKAVEL 69

Query: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131
            GP R  L+ L R T     F  ATA     +  SD     ++  ++  LR+ APG+R+ 
Sbjct: 70  AGPLRAALDQL-RATLEARDFDPATADLTVTIACSDYIQAAVVMPLVVALRARAPGVRVA 128

Query: 132 AARIDGN-TESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGDGMSLE 190
              +  +  E  L SGE DL +         +  Q LF + +V +    HPRL  G+S+E
Sbjct: 129 VRHLMPDLIEQQLASGETDLVLTTPRPTQAHLRTQHLFAETYVLIGRRGHPRLRRGLSIE 188

Query: 191 RYRAEGHVQISFGTGQ--KLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPRH 248
            Y    HV +S   GQ    ++ GLA  G  R +++   +FL + +I+  +D++  +PR 
Sbjct: 189 DYAELEHVIVSPSGGQFRTPVDEGLAALGHRRSVVMSAASFLFIPEIVAASDVVALVPRR 248

Query: 249 IGQTLADMHG-LQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVV 294
           +   L D    L + + P+  EGF V   WH R H   G RWLR ++
Sbjct: 249 L---LRDPPARLVMIELPWLAEGFDVDLLWHERTHGHAGQRWLRALI 292