Pairwise Alignments

Query, 299 a.a., CnmA from Pseudomonas putida KT2440

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 7e-39
 Identities = 102/289 (35%), Positives = 146/289 (50%), Gaps = 6/289 (2%)

Query: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71
           LL + D L   + VTRAAE+L  SQP +S  LARLR+ L DPL VR  G + PT RA +L
Sbjct: 17  LLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVPTARALEL 76

Query: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131
             P  E L  ++ L A   +F  A+A+RRFR+ +SD S    LP ++  LR  APGI L+
Sbjct: 77  APPLTEALGQVQALLA-PNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRREAPGIDLQ 135

Query: 132 --AARIDGNTESALESGEADLAIGFVPWLGGGMYQQVLFEQDWVCLSNPQHPRLGDGMSL 189
              A  +G  +  L +G+ DLA G  P +   +    LFE+ + CL +         + L
Sbjct: 136 IIQASREGMVDGVL-NGDLDLAAGVFPDMPAELRTTPLFEEHYTCLVDRDSLPASGTLDL 194

Query: 190 ERYRAEGHVQISF-GTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPRH 248
             Y +  HV +   G+G   +E  L      R + + LP +    ++I  TDL+ T+   
Sbjct: 195 PTYLSRPHVLLEMRGSGTPEIERALTTIRERRHVAISLPHWGVAPQLIQGTDLILTVSSR 254

Query: 249 IGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLREVVRGL 297
            G    D   L     PF +  F  +  WHAR   D+G +WL   V+G+
Sbjct: 255 -GLLNIDHQHLLAVPAPFHIPSFAFELAWHARRGGDSGLQWLIGQVQGV 302