Pairwise Alignments

Query, 301 a.a., Tn4652, transposase subunit B from Pseudomonas putida KT2440

Subject, 286 a.a., transposase from Agrobacterium fabrum C58

 Score =  151 bits (382), Expect = 1e-41
 Identities = 101/288 (35%), Positives = 154/288 (53%), Gaps = 9/288 (3%)

Query: 1   MIWQLIDKHRQSFGVEPLCRVLQVSPSAYRRHAARLRDRSRRSARAIRDEELAVQIHRVW 60
           M +  I KHR  + V  LC  L VS S +  HA   R  S     A  DE L  +I + +
Sbjct: 1   MKFAFIAKHRSIWPVAWLCEALGVSRSGF--HAWFNRSPSEH---ARHDEVLLERIKQSF 55

Query: 61  QENYEVYGARKVWRQMHREHQVVARCTVERLMREMGLCGVTRGKTVKTTQPDPDNANPRD 120
           Q +   YGAR+VW  +  E        +ERLMR   L    R +       D     P +
Sbjct: 56  QSSDRTYGARRVWHDVLEEGLSCGLHRIERLMRLNALRARPRRRGFPKDAGDRPVVMP-N 114

Query: 121 LVKRQFTAERPNQLWVADFTFVSTWQGFAYVAFIVDVYSRFIVGWRVSRHMRTEFVLDAL 180
           ++ RQF A+RPNQ WVADFT++ T +G+ YVA ++D++SR +VGW ++ +M  + V DAL
Sbjct: 115 VLDRQFVADRPNQKWVADFTYIWTAEGWLYVAAVIDLFSRRVVGWSMNANMTAQLVTDAL 174

Query: 181 EQALHTRRPEPHRLVHHSDRGSQYLSIRYSERLGEAGIEPSVGNTGDSYDNALAETINGL 240
             A+  RR +P  L+HHSD+GSQY S ++   +G+ GI  S+  +G+ +DNA  E+    
Sbjct: 175 IMAI-WRRGKPDALLHHSDQGSQYTSEQFQRLMGDHGITCSMSRSGNVWDNAAMESFFSS 233

Query: 241 YKTELIHKRGPWKSVDSLEWETLKWV-TWFNHQRLLEPIGNRPPAEFE 287
            KTE    R  +++ +    +   ++  ++N +R    +G   P +FE
Sbjct: 234 LKTERT-ARKVYRTRNDARADVFDYIERFYNPKRRHSTLGYLSPDDFE 280