Pairwise Alignments

Query, 345 a.a., transposase from Pseudomonas putida KT2440

Subject, 325 a.a., Mobile element protein from Variovorax sp. SCN45

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 78/286 (27%), Positives = 124/286 (43%), Gaps = 40/286 (13%)

Query: 57  GRPPYPTETMVRILVLKRLYNLSDEQMEYQLLDRMSYKRFCGLASAVNIPDRTTVWTFEN 116
           GR PY  + M+R+ +++  + LSD  ME  L +  S + F GL     IPD TT+  F +
Sbjct: 50  GRRPYSLQAMLRVHLMQNWFALSDPAMEEALYEIASLRTFAGLGLEA-IPDETTILNFRH 108

Query: 117 RI-GDAGAKVLFDGVTAQLLRHGFIARGGQIVDATLVPAPKQ-RNSREENKLVREGAMPA 174
            +  +  A+ +F+ V A L R G + + G IVDAT++ AP   +NS  E           
Sbjct: 109 LLEANDLAEDIFNQVNAHLARKGLLLKRGSIVDATIIAAPSSTKNSTGE----------- 157

Query: 175 NWKPAKRRQKDTDATWTQKHGKNHFGYKLSVNVDKKYKIIRKFETDTASVHDSKHFDALI 234
                    +D +   T+K  + HFG K  + VD    ++    T  A+  D +    L+
Sbjct: 158 ---------RDPEMHQTKKGNQWHFGMKAHIGVDADSGLVHTVTTTAANEADVEQVSDLL 208

Query: 235 DRSNTSRDVYADRGHTSADREGWLKDHGYRNQIQRKGYRNKPLSECQQRR--------NH 286
                +  V+AD G+  A      +    RN       R   +++  Q R         +
Sbjct: 209 HGKEDA--VWADSGYRGA------QSRVKRNVQWHIAGRPSDIAKVTQSRAKARARKQEY 260

Query: 287 RIAKTRARVEHVFASIE-QMGGKLIRTIGQGRANFAMTMMAACYNL 331
           + A  RA+VEH F  I+ Q G   +R  G  +    +  + A  NL
Sbjct: 261 QKASIRAKVEHPFRVIKRQFGLAKVRFKGLAKNTAHVITLFALSNL 306