Pairwise Alignments

Query, 345 a.a., transposase from Pseudomonas putida KT2440

Subject, 338 a.a., IS5 transposase and trans-activator (NCBI) from Escherichia coli BW25113

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 28/271 (10%)

Query: 44  VDRVAPRPVSPQGGRPPYPTETMVRILVLKRLYNLSDEQMEYQLLDRMSYKRFCGLASAV 103
           V+ + P       GR PYP ETM+RI  ++  YNLSD  ME  L +  S + F  L+   
Sbjct: 50  VEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLFARLSLDS 109

Query: 104 NIPDRTTVWTFENRIGDAG-AKVLFDGVTAQLLRHGFIARGGQIVDATLVPAPKQRNSRE 162
            +PDRTT+  F + +     A+ LF  +   L   G +   G +VDAT++ AP    ++E
Sbjct: 110 ALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIEAPSSTKNKE 169

Query: 163 ENKLVREGAMPANWKPAKRRQKDTDATWTQKHGKNHFGYKLSVNVDKKYKIIRKFETDTA 222
           +                   Q+D +   T+K  + HFG K  + VD K  +     T  A
Sbjct: 170 Q-------------------QRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAA 210

Query: 223 SVHDSKHFDALIDRSNTSRDVYADRGHTSADREGWLKDHGYRNQIQRKGYRNKPLSECQQ 282
           + HD      L+      + V AD G+  A +   L +      I  +  + + L +  +
Sbjct: 211 NEHDLNQLGNLL--HGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPR 268

Query: 283 RRNHRI------AKTRARVEHVFASIEQMGG 307
           +    I      A  RARVEH F  I++  G
Sbjct: 269 KNKTAINIEYMKASIRARVEHPFRIIKRQFG 299