Pairwise Alignments

Query, 345 a.a., transposase from Pseudomonas putida KT2440

Subject, 345 a.a., IS5 family transposase from Agrobacterium fabrum C58

 Score =  122 bits (307), Expect = 1e-32
 Identities = 96/288 (33%), Positives = 151/288 (52%), Gaps = 13/288 (4%)

Query: 57  GRPPYPTETMVRILVLKRLYNLSDEQMEYQLLDRMSYKRFCGLASAVNIPDRTTVWTFEN 116
           GRP Y    M + L+L+ LY LSD ++E  L DR+S+KRF GLA    +PD +T+  F N
Sbjct: 51  GRPAYKPLVMFKALLLQSLYGLSDMELEEALGDRLSFKRFVGLALEETVPDHSTLCRFRN 110

Query: 117 -RIGDAGAKVLFDGVTAQLLRHGFIARGGQIVDATLVPAPKQRNSREENKLVREGAMPAN 175
             IG    + LF  +  QL   G I R G ++DAT++     R     N+ + E A  A+
Sbjct: 111 LLIGKDLLEKLFGELDRQLDAAGLILRRGTMLDATIIETAAARPPSGRNRDLDEAAALAD 170

Query: 176 WKPAKRRQ----KDTDATWTQKHGK--NHFGYKLSVNVDKKYKIIRKFETDTASVHDSKH 229
             P ++ +     D DA + +  GK  + +GYK  V VD+   +IR+  T  A+V+D+  
Sbjct: 171 --PHEQEEHGPAHDADARFVRHAGKTGSAYGYKAHVGVDEGSGLIRRIITTPANVNDTVV 228

Query: 230 FDALIDRSNTSRDVYADRGHTSADREGWLKDHGYRNQIQRKGYR-NKPLSECQQRRNHRI 288
            D L+        V AD  + +  RE  LK  G + ++ R+  R ++ LS    R N  I
Sbjct: 229 ADMLV--VGDEAYVLADGAYHTHGREKELKARGIKPRLMRRPNRHHRMLSPRLARFNLLI 286

Query: 289 AKTRARVEHVFASIE-QMGGKLIRTIGQGRANFAMTMMAACYNLKRLV 335
           ++ R+ VE  FA+++ +MG  +IR  G  +A   + + A  +N++R V
Sbjct: 287 SRRRSAVETTFATLKNRMGLDVIRYRGLAKATAQVLLAAMAFNMRRWV 334