Pairwise Alignments

Query, 1004 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 985 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  201 bits (511), Expect = 2e-55
 Identities = 227/990 (22%), Positives = 418/990 (42%), Gaps = 67/990 (6%)

Query: 19  LPAKELHRSYSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQLHYFVPFEELPQE-LISH 77
           L  +E+ R Y+L+  ++E V    +  A  +G A+ +   +     +   E+P   ++++
Sbjct: 20  LDEREIARHYTLTSDDLEIVGRR-RGDATRLGYAMLMLYMRWPGRALEAGEVPPAPVLAY 78

Query: 78  VRQCLRYGARIAPRYSN-PRTLYRHQAAVRQYLQVTPFYSSDGLAVTEQIARDCAVVLEQ 136
           V Q L         Y++  +T   H   +R+      F   D  A  E +A   +V + Q
Sbjct: 79  VAQQLGVAPAAFADYAHRDQTRREHLVEIRRSHGFRIF---DRNAFREVVA--FSVPIAQ 133

Query: 137 RV----DLINAMLDELIQRGYELPAYSTLNNLAETALASAQEVTFNLVVTRAPIEVIYKL 192
            +     + + ++DEL +    LP+ S L  +   A   A+++T+ ++      + +  L
Sbjct: 134 TIIHPGQMADVIVDELRRLQILLPSPSILEAVLRRARQQAEQLTYEVLTNGLLPDTLLGL 193

Query: 193 KELLDTDFGRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLEAIFEGIVDAKIRH 252
            +LL    G+  +  + ++ AP+ P+ +++  LI+ LA++ + G   A  + I       
Sbjct: 194 DDLLARRPGQVATWLSWMRNAPQSPAARNILRLIERLAYIRALGLDRARADMIPALTFDR 253

Query: 253 FAAQAAAADVSELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIRRISTIHKRAKEELE 312
            A + +      L + +  +RH  + A   R+     D    MF + + ++ +RA+    
Sbjct: 254 LADEGSRITPQHLGELNALRRHATLAATGIRLEESLTDATLTMFDKLLGSMARRAENRTR 313

Query: 313 QIQARQRQKLEQLAATLDGVVQILVQEPDDQEAGSLIREYLSPDGNLDRLRETCAEVQAT 372
               +  ++L+    TL G  ++L+      +A S   + L+    LD      A  QA 
Sbjct: 314 DKALKTVRELQGHLRTLTGSCRLLI------DARSKGVDSLAQIEALDWQHFAVAVEQAE 367

Query: 373 --GGNNYLPLIWKHFRSHRSLLFRLSHLL---QLEPTTQDRSLTQALQLIQDSENLHREW 427
             G    +    +    HR++   +   L   +       + L  AL +I +     +  
Sbjct: 368 VLGRPETVDRTAELIERHRTVKLFVGAFLNAFEFRGAGAVQGLLSALAIIAELYRTGKRR 427

Query: 428 IDEHVDLSFASERWVKVVRRPSSEGPPTNRRYLEVCVFSYLASELRSGDMCVQGSVSFAD 487
           + + V L F    W   V R        +R   E+C  S L   LR+GD+ V GS  F D
Sbjct: 428 LPDRVPLRFVPPAWRPFVLRDGI----VDRAAYELCALSQLRERLRAGDIWVAGSRQFRD 483

Query: 488 YRKQLLPWEECLQRLPAYCEKMGLPGTAKEFVASLKTQLEETAQQLDEKFPSC-----RG 542
           +   L+P         A  EK  LP   +      +  +EE   +LD           +G
Sbjct: 484 FDSYLIP----PATFAALREKGPLPLAIE---TDFERHIEERRTRLDTAIEQVTVLARQG 536

Query: 543 D---VSINEAGEPVLRRVAARDIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHF 599
           +   V ++E G  +    AA   PP+    + A   R+P   + D++  ++ W  F+  F
Sbjct: 537 ELPQVKLDENGLIISPLKAAT--PPATEIARRAAYDRLPRVKITDLLLEVDAWTGFSECF 594

Query: 600 -GPMSGNEPKLKEPAERYLMTIFAMGCNLGPSQAARHLTGNVTPHMLSYTNRRHLSLEKL 658
               SG E    +     L  I A G NLG ++ A    G  +   L++ +  H+S    
Sbjct: 595 IHRRSGREA---DDRNALLTVILADGINLGLTRMAETCRG-ASLRQLAHLHDWHISEAAY 650

Query: 659 DKANRELVELYLQLDLPKLWGDGKAVAADGTQFD-------FYDDNLLAGYHFRYRKMGA 711
            +A   L++ +  + L  LWGDG   ++DG QF          D N  +G      + G 
Sbjct: 651 GEALGRLIDAHRAMPLAALWGDGTTSSSDGQQFHAGGRGAAIGDINARSG-----NEPGV 705

Query: 712 VAYRHVANNYIAVFQHFIPPGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATVFAFTH 771
             Y HV++ Y       I     EA YV++GLL     +  +  Y+DT G S  VF    
Sbjct: 706 AFYTHVSDRYDPFASRVIAATAGEAPYVLDGLLYHQTGLTIEEHYTDTGGASDHVFGLMP 765

Query: 772 LLGINLMPRIRNWRDLVMCRPDRGASYKHINRLFTDTADWNLIETHWQDLMQVALSIQAG 831
             G    PR+R+ ++  +       S   +  +  +      +  HW +L++ A SI+ G
Sbjct: 766 FFGYRFAPRLRDIKERRLHLLPGQESGPLLAGMTAEPIALGHVAAHWDELLRFATSIRTG 825

Query: 832 KISSPMLLRKLGSYSRRNKLYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNKIESYN 891
            +++  +LR+L +Y R+N L  A + LG + R+IF+L+W+   +LR+   A  NK E+ N
Sbjct: 826 TVTASAMLRRLSAYPRQNGLALALRELGRLERSIFMLDWLRDIDLRRRTQAGLNKGEARN 885

Query: 892 GFSKWLSFGG-DVIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRILHKLAREGWQFTD 950
             ++ L F     + +   + Q  R    +++ +++IL NT  +   L  +        D
Sbjct: 886 ALARALFFNQLGELRDRRFENQTYRASGLNLLVAAIILWNTRYLEMALADIGT-----AD 940

Query: 951 EDVSFLSPYLTSNVKRFGEFNLKLNRPPEP 980
           E    ++P    ++   G+++  +   P+P
Sbjct: 941 EIARHIAPLGWEHISLTGDYSWNVEDQPDP 970