Pairwise Alignments

Query, 1004 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 963 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  203 bits (517), Expect = 4e-56
 Identities = 218/961 (22%), Positives = 403/961 (41%), Gaps = 41/961 (4%)

Query: 23  ELHRSYSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQL-HYFVPFEELPQELISHVRQC 81
           EL R Y+LSD ++  +    ++     G A+QL V +       P E +P ++   +   
Sbjct: 24  ELLRHYTLSDEDLGHIRQRRRAHN-RFGFALQLCVLRYPGRVLAPGELIPAQVSDFIAAQ 82

Query: 82  LRYGARIAPRYS-NPRTLYRHQAAVRQYLQVTPFYSSDGLAVTEQIARDCAVVLEQRVDL 140
           L   +     Y+    T + H A +R+      F       + E IAR+         DL
Sbjct: 83  LGLTSDDLLLYAAREETRHEHLADLRRIYGYRSFSGRGARDLREWIAREAEAATSNE-DL 141

Query: 141 INAMLDELIQRGYELPAYSTLNNLAETALASAQEVTFNLVVTRAPIEVIYKLKELLDTDF 200
               + E  +    LP  ST+  L   AL  A+    +L+  R    +   L  LL+   
Sbjct: 142 ARRFVAECRRTRTILPGSSTIERLCADALVEAERRIEDLIAHRITPTLSENLAHLLEDTV 201

Query: 201 GRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLEAIFEGIVDAKIRHFAAQAAAA 260
             R + F  L+Q     +      L+D L +L+ F     + +G+   ++     Q    
Sbjct: 202 DGRVTRFVWLRQFEVGANSAAANRLMDRLEYLQRFDLPADLLDGVPAHRVTRLRRQGERY 261

Query: 261 DVSELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIRRISTIHKRAKEELEQIQARQRQ 320
               ++D    +R  ++       R    D + E   R +  ++ RA E L     R   
Sbjct: 262 YADGMRDLPEDRRLAILAVCTLEWRSSLADVIVETHDRIVGRLY-RASERL--CNTRIAD 318

Query: 321 KLEQLAATLDGVVQILVQEPDDQEAGSLIREYLSPDGNLDRLRETCAEVQATGGNNYL-- 378
           +   +  TL    +I       Q+ G+ +   ++     +R R   A   A    N L  
Sbjct: 319 EKAAVRDTLKSFAEIGGALLGAQDDGTALDGIIATGPGWERFRTLVATASAL--TNVLAA 376

Query: 379 -PLIWKHFRSHRSLLF--RLSHLLQLEPTTQDRSLTQALQLIQDSENLHREWIDEHVDLS 435
            PL       HR  L+  R+  LL ++       L  A+ ++++        +D  VD  
Sbjct: 377 DPLSRVLDGYHRFRLYAPRMLRLLDMQAAPIATPLLAAVAMLRNGIK-----VDPPVDFL 431

Query: 436 FASERWVKVVRRPSSEGPPTNRRYLEVCVFSYLASELRSGDMCVQGSVSFADYRKQLLPW 495
             + +W + +R      P  + R  E+ V  ++    RSGD+ + GS  + D ++ L+P 
Sbjct: 432 RPNSKWHRHLRAE----PSGDHRLWEIAVLFHIRDAFRSGDIWLAGSRRYGDLKQLLVPP 487

Query: 496 EECLQRLPAYCEKMGLPGTAKEFVASLKTQLEETAQQLDEKFPSCRGDVSINEAGEPVLR 555
           +   Q       ++ +P    E++A  + +L+   ++      +      I E G+  + 
Sbjct: 488 QAIEQTA-----RLAVPLRPGEWLAERRARLDTRLKEFGRAARTGTIPGGIIENGKLHID 542

Query: 556 RVAARDIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHFGPMSGNEPKLKEPAER 615
           ++ A D P  A  L   L Q++P   + D++  ++    F+  F  +    P        
Sbjct: 543 KLRA-DTPEGAEDLVLDLYQQLPPARITDLLLEVDERTGFSEAFTHLRTGAPCSDRIG-- 599

Query: 616 YLMTIFAMGCNLGPSQAARHLTGNVTPHMLSYTNRRHLSLEKLDKANRELVELYLQLDLP 675
            +  + A G NLG  + A     +    +L    R H+     D+A   +VE +  L + 
Sbjct: 600 LMNVLLAEGVNLGLRKMAAATNTHSFWELLRIA-RWHVEGSAYDRALAMIVEAHAALPMA 658

Query: 676 KLWGDGKAVAADGTQFDFYDD----NLLAGYHFRYRKM-GAVAYRHVANNYIAVFQHFIP 730
             WG G++ ++DG  F   +     NL+   + +Y  + G   Y HV++ Y       IP
Sbjct: 659 AFWGQGQSASSDGQFFLATEQGEAMNLI---NAKYGNVPGLKGYSHVSDQYAPFATQVIP 715

Query: 731 PGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATVFAFTHLLGINLMPRIRNWRDLVMC 790
             + EA Y+++GLL  D        ++DT G +  VFA   LLG    PRIR+     + 
Sbjct: 716 ATVSEAPYILDGLLMNDAGRRVRQHFADTGGFTDHVFAACALLGYRFAPRIRDLPQKRLY 775

Query: 791 RPDRGASYKHINRLFTDTADWNLIETHWQDLMQVALSIQAGKISSPMLLRKLGSYSRRNK 850
                A+  ++  L     +  LIE +W D++++  +I AG ++   +LRKL SY R+N+
Sbjct: 776 AFTPNATPANVRALVGGKINEPLIERNWPDILRIMATIAAGIVAPSQILRKLASYPRQNE 835

Query: 851 LYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNKIESYNGFSKWLSF-GGDVIAENDP 909
           L  A + +G + RT+F+++WI    L+++     NK E+++   + +SF     I +   
Sbjct: 836 LALALREVGRIERTLFMIDWILDAGLQRQAQIGLNKGEAHHALKRAISFHRRGEIRDRSG 895

Query: 910 DEQQKRLRYNDMVASSVILQNTVDMMRILHKLAREGWQFTDEDVSFLSPYLTSNVKRFGE 969
           + Q  R+   +++A+ +I  NT+ +  +++  A  G     + ++ +SP    ++   GE
Sbjct: 896 EGQHYRIAGMNLLAAIIIFWNTMKLGEVVNTRAASGTHIAPDLLAHVSPLGWEHINLTGE 955

Query: 970 F 970
           +
Sbjct: 956 Y 956