Pairwise Alignments

Query, 1004 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 983 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  207 bits (526), Expect = 4e-57
 Identities = 228/993 (22%), Positives = 408/993 (41%), Gaps = 69/993 (6%)

Query: 15  LPSQLPAKELHRS--YSLSDSEIEWVNNT------------AKSPALSIGLAIQLKVFQQ 60
           +P+++P  +  R+   +L DSE   V +             A++PA  +  A+QL   + 
Sbjct: 1   MPARIPMTQRQRAALLALPDSEAAVVRHHGLDAEDLAAIGFARTPATRLSYALQLCCLRY 60

Query: 61  L-HYFVPFEELPQELISHVRQCLRYGARIAPRYSNPR-TLYRHQAAVRQYLQVTPFYSSD 118
              +    E LP  ++ H+ + +   A +   ++    T Y   AA++     T      
Sbjct: 61  PGRHLRTGELLPAIMLDHIAEQVGVDAGVVADFARRAPTRYDQLAAIKARFGFTDLSRPA 120

Query: 119 GLAVTEQIARDCAVVLEQRVDLINAMLDELIQRGYELPAYSTLNNLAETALASAQEVTFN 178
              +   +  +   +++ R+ L++ +LDEL  R   +P  S +  +A  A+   +     
Sbjct: 121 RGIMMTWLETEAMAIVDGRI-LLDRLLDELRTRRIVIPGISVVERMAAEAMLRTETDLVA 179

Query: 179 LVVTRAPIEVIYKLKELLDTDFGRRQSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDL 238
            V  +   ++  +L  L+B     RQS  + L++   + +   L  +++ +A +   G  
Sbjct: 180 AVDAKLDADMRQRLDMLIBEKVHDRQSRLSWLREPEPRVASASLAEILEKVAIIHRTGIS 239

Query: 239 EAIFEGIVDAKIRHFAAQAAAADVSELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIR 298
               + + + ++  FA +         +   + +R  ++LA +  M     D    MF  
Sbjct: 240 SIPVDPLHEPRLTQFAREGVRYTAQAFQQMRVSRRRVILLATLREMEATLTDAAIAMFSA 299

Query: 299 RISTIHKRAKEELEQ---IQARQ-RQKLEQLAATLDGVVQILVQEPDDQEAGSLIREYLS 354
            +   H RA++ LEQ   I  R+ R +L ++A  L+ V Q      D    G+ +R+ + 
Sbjct: 300 LMGRAHLRARKRLEQRVAISGREGRDRLMRIATVLETVSQAARAGGD---IGAALRDIVP 356

Query: 355 PDGNLDRLRETCAEVQATGG---NNYLPLIWKHFRSHRSLLFRLSHLLQLEPTTQDRSLT 411
               LD L    A ++ T     ++ L  I   +R+ +         L         +L 
Sbjct: 357 ----LDMLDADAAIIRRTAAPHRDDVLSEIAAEYRTFKRTGPLFLQALDFHGRAGTAALR 412

Query: 412 QALQLIQDSENLHREWIDEHVDLSFASERWVKVVRRPSSEGPPTNRRYLEVCVFSYLASE 471
            A+ ++ + +   R+ +   V L     RW     R        +R + E+  +  L + 
Sbjct: 413 DAMAILSNLDGDWRKPLPADVPLGHVERRW----HRHVVVAGKIDRTHWEMATYGALTNA 468

Query: 472 LRSGDMCVQGSVSFADYRKQLLPWEECLQRLPAYCEKMGLPGTAKEFVASLKTQLEETAQ 531
           L SGD+ V  S         L P      + P     +G P             L++ A 
Sbjct: 469 LASGDIWVPRSRLHRSLDVLLAPLSGAALQPPF---SLGNP----------HAWLDQRAA 515

Query: 532 QLDEKFPSCRGDVSINEAGEPVLRRVAARDIPPSAIS-----------LQTALMQRMPAR 580
           QLD    S   DV+ N AG         R   P  +            L  A    +PA 
Sbjct: 516 QLD----SALRDVAHNLAGRDAALFAGERLRFPKELKDDDARHDEGRRLTLACYDMLPAT 571

Query: 581 HVLDIMANIEHWIQFTRHFGPMSGNEPKLKEPAERYLMTIFAMGCNLGPSQAARHLTGNV 640
            + D+++ +E W  FTRHFG +S   P   E A  +L T+ A   NLG S+ A  + G  
Sbjct: 572 RITDVLSQVERWTGFTRHFGHVSTGLPPGDEQA--FLATLIAEATNLGLSRMAE-VCGAG 628

Query: 641 TPHMLSYTNRRHLSLEKLDKANRELVELYLQLDLPKLWGDGKAVAADGTQFDFYDDNLLA 700
           +   L      H+  E    A   L +      +   +G G   +ADG  F         
Sbjct: 629 SRRALLRMQTWHMREETFRAALACLTDAIHAEPIAAWFGQGHRASADGQAFYLGGPGEAG 688

Query: 701 G-YHFRYRKMGAVA-YRHVANNYIAVFQHFIPPGIWEAIYVIEGLLKADLSVEADTVYSD 758
           G  +  Y +   V  Y  + + Y  + Q  I     EAI+ ++GLL  D + +   ++ D
Sbjct: 689 GAVNAHYGRDPVVKIYTTITDRYAPLHQTVIAGTAGEAIHALDGLLGHDSNADLTALHVD 748

Query: 759 TQGQSATVFAFTHLLGINLMPRIRNWRDLVMCRPDRGASYKHINRLFTDTADWNLIETHW 818
             G S  VFA  HLLG++  PRI    D  +   +    Y  +  LF    + +LI +HW
Sbjct: 749 GGGVSDIVFATMHLLGLDFEPRIPRLSDRRLYAFEPSKRYGRLAPLFGHRLNRDLIVSHW 808

Query: 819 QDLMQVALSIQAGKISSPMLLRKLGSYSRRNKLYHAAQALGSVIRTIFLLNWIGSRELRQ 878
            D+ +V  +I+   ++  ++L+KL +Y ++N L  A + +G + RT+F L W     LR+
Sbjct: 809 PDIERVIGAIRHRTVTPSLILKKLSAYRQQNSLAAALREIGRIERTLFTLRWFEDPALRR 868

Query: 879 EVTANTNKIESYNGFSKWLSFGG-DVIAENDPDEQQKRLRYNDMVASSVILQNTVDMMRI 937
            VTA  NK E+ N  ++ ++F       +   + QQ R    ++V +++IL N   + R 
Sbjct: 869 TVTAELNKGEARNSLARAVAFHRLGRFRDRGLENQQTRAAALNLVTAAIILFNCRYLGRA 928

Query: 938 LHKLAREGWQFTDEDVSFLSPYLTSNVKRFGEF 970
           + ++ R G       +S LSP     +   G++
Sbjct: 929 VDEMRRRGSPIDPAMLSRLSPLGWDRINLTGDY 961