Pairwise Alignments

Query, 1004 a.a., putative transposase from Pseudomonas putida KT2440

Subject, 989 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  210 bits (534), Expect = 4e-58
 Identities = 221/965 (22%), Positives = 408/965 (42%), Gaps = 53/965 (5%)

Query: 28  YSLSDSEIEWVNNTAKSPALSIGLAIQLKVFQQLHYFV-PFEELPQELISHVRQCLRYGA 86
           Y+LS  ++E V      PA  +GLA Q+ + +   + + P   LP  ++ ++   L    
Sbjct: 29  YTLSAEDVELVGRRY-GPANRLGLAAQIALMRHPGFGLQPEIGLPDVILQYLAAQLFVDP 87

Query: 87  RIAPRYSN-PRTLYRHQAAVRQYLQVTPFYSSDGLAVTEQIARDCAVVLEQRVDLINAML 145
                Y    +T   H   V +YL + PF   D LA+   +A   A   ++   ++ A++
Sbjct: 88  SSFSAYGQRAQTRTDHADLVARYLGIRPFRRGD-LALALNLAAQAAEYTDRGEPIVRALM 146

Query: 146 DELIQRGYELPAYSTLNNLAETALASAQEVTFNLVVTRAPIEVIYKLKELL--DTDFGRR 203
             L    + LP+  TL        A A++     +V       + +L EL+  + DFG  
Sbjct: 147 VGLKGERFILPSGDTLERAGLAGRARARKAAAAAIVEGLSSAELTRLDELVINNPDFG-- 204

Query: 204 QSDFNALKQAPKKPSRKHLEVLIDHLAWLESFGDLEAIFEGIVDAKIRHFAAQAAAADVS 263
            +    L+   + P+  ++  L++ L ++   G    +   I + +   F  +   A   
Sbjct: 205 MTPLAWLRNFEEAPTAANINGLLERLRYVRGIGIHPVVGGAIPEFRFAQFVREGGVAPAF 264

Query: 264 ELKDCSLPKRHTLMLALIYRMRVRTRDHLAEMFIRRISTIHKRAKEELEQIQARQRQKLE 323
            L D S+ +R   + A +  +  R  D   +MF R I  +  RA+   E+      Q + 
Sbjct: 265 LLSDYSVNRRRATLTAAVIDLEARLADAAIQMFDRLIGGMFTRARRGRERRYQDSIQSVG 324

Query: 324 QLAATLDGVVQILVQEPDDQEAGSLIREYLSPDGNLDRLRETCAEVQATG---GNNYLPL 380
           QL       +  L +    Q  G  + E +       RL    A+V A     G + L  
Sbjct: 325 QLMRLFGATITALDEAV--QNGGDPL-ELIDEAVGWHRLVAAKAQVDALADLAGEDALVT 381

Query: 381 IWKHFRSHRSLLFRLSHLLQLEPTTQDRSLTQALQLIQDSENLHREWIDEHVDLSFASER 440
             + + + R            + +    +L +A+ +I+D+       + + V L F + +
Sbjct: 382 ATERYATLRRFSPAFLDAFTFKASGTGTALIKAIDVIRDANTRKSRDLPDGVPLPFPNRQ 441

Query: 441 WVKVVRRPSSEGPPTNRRYLEVCVFSYLASELRSGDMCVQGSVSFADYRKQLLPWEECLQ 500
           W +++    +E    +RR  E+ + + L   LR+GD+ ++G+ ++              Q
Sbjct: 442 WKRLI----TESGRIDRRRYEIAIMATLRDRLRAGDVWIEGTRNY--------------Q 483

Query: 501 RLPAYCEKMGLPGTAK-----EFVASLKTQLEETAQQLDEKFPSCRGDVSINEAGEPVLR 555
           R  AY   +G    AK      F ++  + L + A+ LD +       +  N+     L 
Sbjct: 484 RFDAYL--LGRRDAAKVADVLPFDSNAASYLADRARNLDWRLRRFAKQLKTNKLEGVSLE 541

Query: 556 RVAAR------DIPPSAISLQTALMQRMPARHVLDIMANIEHWIQFTRHFGPM-SGNEPK 608
           R   +        PP A +L   L   +P   + +++  +     F   F  + SG E  
Sbjct: 542 RDRLKLQQMPPVTPPEAEALDRKLDTLLPRVRITELLLEVAERTGFLNAFRDLRSGKE-- 599

Query: 609 LKEPAERYLMTIFAMGCNLGPSQAARHLTGNVTPHMLSYTNRRHLSLEKLDKANRELVEL 668
             +     L  I A G NLG  + A    G V+   L++T+  +LS E    A   ++  
Sbjct: 600 -HDNPSTVLAAILADGTNLGLERMANASEG-VSYAQLAWTHNWYLSPENYQAALAMIISA 657

Query: 669 YLQLDLPKLWGDGKAVAADGTQF-DFYDDNLLAGYHFRY-RKMGAVAYRHVANNYIAVFQ 726
           + +L   + WG G + ++DG  F      +  A  + +Y  + G   Y H+++++ +   
Sbjct: 658 HHELPFARHWGAGTSSSSDGQFFRSGRSRSGAADVNAKYGAEPGVKIYSHLSDHFASFGS 717

Query: 727 HFIPPGIWEAIYVIEGLLKADLSVEADTVYSDTQGQSATVFAFTHLLGINLMPRIRNWRD 786
             +     EA YV++GL+    ++     Y+DT G +  VFA  HLLG    PR+R+  D
Sbjct: 718 RIMSATAGEAPYVLDGLVLGAGNLPLHEHYTDTGGATDHVFALCHLLGFRFAPRLRDIGD 777

Query: 787 LVMCRPDRGASYKHINRLFTDTADWNLIETHWQDLMQVALSIQAGKISSPMLLRKLGSYS 846
             +      ++YK I  L   T     IE  W D++++  SI+ G ++  ++LRKL +Y 
Sbjct: 778 RKLGSIAAPSTYKGIENLMGRTIKTAAIEADWDDIVRIVASIKDGTVAPSVILRKLAAYK 837

Query: 847 RRNKLYHAAQALGSVIRTIFLLNWIGSRELRQEVTANTNKIESYNGFSKWLSFGGD-VIA 905
           R+N+L  A   LG + RT+F L+W+   ELR+   A  NK E+ +  +  +         
Sbjct: 838 RQNRLDFALAELGRIERTLFTLDWLEQPELRRACQAGLNKGEARHTLAAAIYTNRQGRFT 897

Query: 906 ENDPDEQQKRLRYNDMVASSVILQNTVDMMRILHKLAREGWQFTDEDVSFLSPYLTSNVK 965
           +   + Q+ R    +++ +++   NTV + R    L   G  F    ++ LSP   +++ 
Sbjct: 898 DRSLENQEFRASGLNLLIAAISYWNTVYLDRAAQHLNAVGTTFDAALLAHLSPMGWAHIS 957

Query: 966 RFGEF 970
             G++
Sbjct: 958 LTGDY 962