Pairwise Alignments

Query, 460 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 474 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  147 bits (372), Expect = 6e-40
 Identities = 127/454 (27%), Positives = 204/454 (44%), Gaps = 12/454 (2%)

Query: 17  SRIASRTYTPGARIPSVRAMAQTMQVSVSTVLEAYERLMAEGVLNSRPGSGFYVAGPVAP 76
           +RI    Y PG R+PSVRA++    VS+STV +AY  L   G+   +P SG++V      
Sbjct: 13  TRIEQGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRLLEDNGLAMPKPKSGYFVPVSREL 72

Query: 77  LVLTELGPRLDREVD-PLWISRQSLDTA---SDALKPGCGWLPASWMFEAGLRKALRTVA 132
             L E+G    R V+   W     L  A    D ++ G G           L ++L  V+
Sbjct: 73  PALPEVGRPAQRPVEISQWDQVLELIRAVPRKDVIQMGRGMPDVLSPTIKPLLRSLARVS 132

Query: 133 RSDTSKLTEYASPLGHLPLRQFLSRKLTGIGIEAPLEQIMLTESGTHAIDLICRFLLEPG 192
           R        Y + LG + LR+ ++R     G +   E I++T     A+      + EPG
Sbjct: 133 RRQDLPGLYYDNILGCVELREQIARLSLDSGCQLTAEDIVITTGCHEALSASIHAICEPG 192

Query: 193 DTVLVDDPCYFNFHALLKAHRVNIVGVPY-TATGPDIDAFGAALLAHSPRLYITNSGIHN 251
           D V VD P +      LK   +  + +P    TG  ++A   AL     ++       +N
Sbjct: 193 DIVAVDSPSFHGAMQTLKGLGMKALEIPTDPITGISLEALELALEQWPIKVIQLTPNCNN 252

Query: 252 PTGATLSPVTAHRLLKLADNSSLVIVEDDIFGDFE-NAPAPR-LSAFDGLSRVIQIGSFS 309
           P G  +       LL LA    + I+EDD++G+   + P PR + +FD   RV+   SFS
Sbjct: 253 PLGYIMPEARKKALLTLAQRFDVAIIEDDVYGELAYSYPRPRTIKSFDEDGRVLLCSSFS 312

Query: 310 KTISASIRCGYIAARSDWIESLVDLKIATTFGGGRLAADIIHLAITDSGYRKHMESVRL- 368
           KT++  +R G++A    ++E ++ +K  +T          I   +    +  H+  +R  
Sbjct: 313 KTLAPGLRIGWVAP-GRYLERVLHMKYISTGCTATQPQIAIAEFLKGGHFEPHLRRMRTQ 371

Query: 369 --RLAEAMDRTVARLQAIGIKPWITPQSGMYVWCQLPQGKDAATLARACLNEGVVLAPGN 426
             R  + M   V+R    G +    PQ    +W +LP+G D   L R  + +GV +A G+
Sbjct: 372 YQRNRDLMIDWVSRYFPTGTRA-SRPQGSFMLWIELPEGFDTLKLNRVLVEQGVQVAVGS 430

Query: 427 AFSQSMAAGDFLRFNVAQSADAKIYEVLKRTLSA 460
            FS S    + LR N A     +I E +++  +A
Sbjct: 431 IFSASGKYRNCLRMNYAAKPTPQIEEAVRKVGAA 464