Pairwise Alignments

Query, 460 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 479 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  160 bits (406), Expect = 7e-44
 Identities = 116/440 (26%), Positives = 203/440 (46%), Gaps = 16/440 (3%)

Query: 14  EIQSRIASRTYTPGARIPSVRAMAQTMQVSVSTVLEAYERLMAEGVLNSRPGSGFYVAGP 73
           ++   I    Y PG R+PSVR M+  + VS +TVL+AY  L  +G++ +RP SG+YV   
Sbjct: 13  QLAEDIRRGVYQPGERVPSVRKMSSQLNVSHATVLQAYANLEDQGLIRARPQSGYYVHQT 72

Query: 74  VAPLVLTELGPRLDREVDPLWISRQSL------DTASDALKP-GCGWLPASWMFEAGLRK 126
            A   LT   P + R   P  ++R S+      ++  + + P G       ++    L +
Sbjct: 73  PA---LTAPTPDIARVERPGLVTRSSIIQQVLGESRREGVFPLGAAVPSVDYLPVRALHQ 129

Query: 127 ALRTVARSDTSKLTEYASPLGHLPLRQFLSRKLTGIGIEAPLEQIMLTESGTHAIDLICR 186
            L  V R  + +   Y    G  PLR+ ++ ++   G+     ++++T     A+ +  R
Sbjct: 130 QLAKVTRFQSPRAFSYMFSPGFEPLRRQVAIRMRDAGVVVDPSEVVITHGCVDALQMSLR 189

Query: 187 FLLEPGDTVLVDDPCYFNFHALLKAHRVNIVGVPY-TATGPDIDAFGAALLAHSPRLYIT 245
            L  PGD +  + P Y+    L     + ++ +P   +TG  ++A   A    S +  + 
Sbjct: 190 VLTRPGDLIAAESPTYYGLLQLADLLGLKVIEIPSDPSTGMSLEALQLAANQWSIKALVL 249

Query: 246 NSGIHNPTGATLSPVTAHRLLKLADNSSLVIVEDDIFGD--FENAPAPRLSAFDGLSRVI 303
            + + NP G T+      +LL+LA +  + IVEDDI+G+  FE      L A+D L RVI
Sbjct: 250 TARLSNPLGGTMPEERQKQLLRLASDFDIQIVEDDIYGELMFELGRTKALKAYDRLDRVI 309

Query: 304 QIGSFSKTISASIRCGYIAARSDWIESLVDLKIATTFGGGRLAADIIHLAITDSGYRKHM 363
              SFSKT+S  +R G++ A   + + +  L++ +T     +    +   + + GY +H+
Sbjct: 310 YCSSFSKTLSPGVRIGWMIA-GKYQQEIQRLQMFSTHSACSVTQMGVAAYLENGGYDRHL 368

Query: 364 ESVRLRLAEAMDRTVARLQAIGIK--PWITPQSGMYVWCQLPQGKDAATLARACLNEGVV 421
             +R    + +      +Q    +      P  G  +W  LP   +   L    L +G+ 
Sbjct: 369 RYIRQEYRKNLSAFQLAVQQYFPEGTQMTRPTGGFILWVSLPGRVNTQELHVRALQQGIS 428

Query: 422 LAPGNAFSQSMAAGDFLRFN 441
           +APG  FS +      +R N
Sbjct: 429 IAPGLIFSNTEQFNHCIRLN 448