Pairwise Alignments

Query, 460 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 7e-41
 Identities = 128/437 (29%), Positives = 198/437 (45%), Gaps = 12/437 (2%)

Query: 17  SRIASRTYTPGARIPSVRAMAQTMQVSVSTVLEAYERLMAEGVLNSRPGSGFYVAGPVAP 76
           +RI    Y PG R+PSVRA+++   VS+STV +AY  L   G+++ RP SG++V+     
Sbjct: 33  ARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPKSGYFVSDQRQL 92

Query: 77  LVLTELGPRLDREVD-PLWISRQSLDTAS---DALKPGCGWLPASWMFEAGLRKALRTVA 132
             L  +     R VD   W     L  ++   D ++ G G           L ++L  ++
Sbjct: 93  PALPAVSRPAQRPVDISQWEQVLELVRSTPRQDVVQLGRGMPDIDSPTLKPLLRSLAQLS 152

Query: 133 RSDTSKLTEYASPLGHLPLRQFLSRKLTGIGIEAPLEQIMLTESGTHAIDLICRFLLEPG 192
           R        Y +  G+L LR+ ++R +   G       +++T     A+    R + EPG
Sbjct: 153 RRQDMPGLYYDNIHGNLALREQVARLMLDSGCRLGPADLVITTGCHEALSCSIRAVCEPG 212

Query: 193 DTVLVDDPCYFNFHALLKAHRVNIVGVPY-TATGPDIDAFGAALLAHSPRLYITNSGIHN 251
           D V VD P +      LK   +  + +P    TG  ++A   AL     +L       +N
Sbjct: 213 DIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELALEQWPIKLIQITPSCNN 272

Query: 252 PTGATLSPVTAHRLLKLADNSSLVIVEDDIFGDFE-NAPAPR-LSAFDGLSRVIQIGSFS 309
           P G  +       LL LA    + I+EDD++GD     P PR L +FD   RV+   SFS
Sbjct: 273 PLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTLKSFDDDGRVLLCSSFS 332

Query: 310 KTISASIRCGYIAARSDWIESLVDLKIATTFGGGRLAADIIHLAITDSGYRKHMESVR-- 367
           KT++  +R G++A    ++E ++ +K  +T          I   I    Y+ H+  +R  
Sbjct: 333 KTLAPGLRIGWVAP-GRYLERVLHMKYISTGSTASQPQLAIADFIAAGHYQPHVRRMRSQ 391

Query: 368 -LRLAEAMDRTVARLQAIGIKPWITPQSGMYVWCQLPQGKDAATLARACLNEGVVLAPGN 426
             R  + M   V R    G +    PQ G  +W +LP+  D   L RA L +GV +A G+
Sbjct: 392 YQRGRDLMGDWVTRYFPAGTRV-SRPQGGFMLWVELPEHLDTLRLNRALLEQGVQVAVGS 450

Query: 427 AFSQSMAAGDFLRFNVA 443
            FS S      LR N A
Sbjct: 451 IFSASGKFRHCLRMNFA 467