Pairwise Alignments

Query, 467 a.a., putative sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 860 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  122 bits (305), Expect = 6e-32
 Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 54/296 (18%)

Query: 188 ALQQEIEERKQLESQLVQSEKLASLGQMAAGVAHEINNPIGFVSSNLGTLGGYFQQLVAM 247
           A  ++I E+KQ E+ L +S+K+ ++GQ+  G+AH+ NN +G ++ NL  L          
Sbjct: 465 AFIRDITEQKQTEAALRRSQKMEAVGQLTGGIAHDFNNLLGIITGNLELL---------- 514

Query: 248 LDAYREAELMLGANETTGRLQRLREQTELEFLMEDIPILIKESKDGIGRVAHIVKDLKDF 307
                  E  +  +E+                M+ +   ++ ++ G    A + + L  F
Sbjct: 515 -------ERTVQGSESG---------------MKRVQTALRSARRG----ADLTRRLLSF 548

Query: 308 SRVD-SAQQWQLADLQQGIDSTLNIVASELKHKADL-VKRYQPLPPVECLPSQINQVIMN 365
           SR D  AQ     D+   I     +V   L    ++  +        +   S+    ++N
Sbjct: 549 SRQDPKAQGKSRTDIADAISGMQEMVQRSLTKVIEVRTQMAADTWHADINRSEFEDCLLN 608

Query: 366 LVLNAAQAMGPERGTITLGTAH---------------QGAWVCIEVADTGAGIAPENIKK 410
           L LNA  AM P+ G +T+  ++                G +V + V+DTG GI  E + +
Sbjct: 609 LCLNARDAM-PQGGVLTVEASNVEVDDEMRRADPNLTPGRYVVVSVSDTGTGIPKEIVDR 667

Query: 411 IFDPFFTTKPVGQGTGLGLSLSYGIVKKHGGEITVSSQVGVGTTFRVQLPVKQSAT 466
           IF+PFFTTK  G+GTGLGL+++YG  ++ GG I V S+ G+GTTFR+ LP     T
Sbjct: 668 IFEPFFTTKERGKGTGLGLAMAYGFARRSGGHIRVYSEPGIGTTFRLYLPKAADGT 723