Pairwise Alignments

Query, 233 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 252 a.a., Putative transmembrane protein from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 71/245 (28%), Positives = 114/245 (46%), Gaps = 34/245 (13%)

Query: 12  RRLRLQVMRGRV-----GLGLVAALSVLAGMTDAIGLLALGDFVSFMSGNTTRLAVAISE 66
           RRLR    R R       LGL+ A +  AG  +A G L L  + S M+G  ++LA  +  
Sbjct: 2   RRLRFLTNRHRAPSTNTALGLLLAFN--AGAVNAGGFLVLHMYTSHMTGFASQLADGMVL 59

Query: 67  ADLALVLRLSGAVLGFVAGNALGVLLAHGLRRR------AWPVLLVVAALLAF------A 114
            ++ L+L   GA+L F+ G A+  +L +  R+       A P++L  A +  F       
Sbjct: 60  GNVTLLLNALGAILAFLTGAAVCAMLVNWGRQHRMHGVYALPLVLEAALMFPFGLMGAIT 119

Query: 115 AAWPLPATFP-ALLAATLAMGMINAVVEQVNGLPIGLTYVTGALSRFGRGLGRWL----- 168
             W  P   P  +L  +  MG+ NAV  + +G  I  T++TG ++  G  +G+ L     
Sbjct: 120 LTWATPFAVPLTVLLLSFIMGLQNAVASKTSGGSIRTTHMTGNITDMGIEIGKMLYWNGR 179

Query: 169 -----LGERRNGWRVQLV-PWAGM-LLGAALGAWLQQHLGLQALAGSCALACVLAL--IS 219
                L  R +  R++      GM +LG A+GA   +++G   +    AL   L++  + 
Sbjct: 180 ARPAALAVRHDRARMRRAGGLVGMFVLGGAVGALGFKYVGFVCVVPLAALLLALSIPPLL 239

Query: 220 RFIPR 224
           R IPR
Sbjct: 240 RDIPR 244