Pairwise Alignments

Query, 463 a.a., gamma-aminobutyrate permease from Pseudomonas putida KT2440

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score =  533 bits (1372), Expect = e-156
 Identities = 264/452 (58%), Positives = 334/452 (73%), Gaps = 1/452 (0%)

Query: 8   LSHGLKSRHVTMLSIAGVIGAGLFVGSGRAIAEAGPATILAYILAGGLVVLVMRMLAEMA 67
           L+ G K RHVTMLSIAG+IGAGLFVGSG AIA AGPA +LAY+ +G LVVLVMRML EMA
Sbjct: 13  LAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGEMA 72

Query: 68  VASPDTGSFSTYADLAIGKWAGYTIGWLYWWFWVLIIPIEANIAATIINSWVPQLEIWVL 127
           VA+PDTGSFSTYAD AIG+WAG+TIGWLYWWFWVL+IPIEA  A  I+N W PQ++ W+ 
Sbjct: 73  VANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQIDAWLF 132

Query: 128 SLVITLLLTATNLFSVKNYGEFEFWLALVKVVAIVSFIALGVCAIFGLLPGAGVSGVSRL 187
           +L+   LL  TNLFSV  YGEFEFW A+ KV+AI++FI LG   + G +P   VSG+SRL
Sbjct: 133 ALLSIFLLVVTNLFSVSKYGEFEFWFAMAKVIAIIAFIGLGFAVLMGWIPEREVSGLSRL 192

Query: 188 WDT-GGFMPNGFGAVLSAMLITMFSFLGAEVVTIAAAESDEAGKHISKATNSVIWRITLF 246
            +  GGF PNG  AV+ A +  MFSF+G E VTIAAAES    ++I++AT SV+WRI +F
Sbjct: 193 MEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWRIGVF 252

Query: 247 YILSIFIVIALVPWTDPRLATEGSYVTVLDTLGVPNAKAIIDFVVLTSVTSCLNSSLYTA 306
           Y+LSIF+VI++VPW DP LA+ GSY   L+ + +P+AK ++D VVL +V SC+NSS+Y A
Sbjct: 253 YLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVASCMNSSIYIA 312

Query: 307 SRMVYSLSRRGDAPACAQITSRSGTPVVAVLLSTGAAFLAVIANYLVPAKVFGFLMASSG 366
           SRM++SL +RGDAPA  + TS +  P  AV+ ST       + +Y  PA +F FL+ASSG
Sbjct: 313 SRMLFSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAGLFQFLLASSG 372

Query: 367 AIALLVYLVIAISQLRLRQRLTAQGKTLGYRMWLFPWLTWGVILFISGVLVLMLFRPDHR 426
           AIALLVYLVIA+SQLR+R+ L  +  TL ++MWLFPWLTW VI FI   L +ML  P+HR
Sbjct: 373 AIALLVYLVIAVSQLRMRKILRQRNVTLTFQMWLFPWLTWLVIAFICAALTVMLVTPEHR 432

Query: 427 LEVVSTMVLAVLVVCSGVLVTRRRARGGAVAG 458
            EV ST+ LA+++   G+L  R+  R     G
Sbjct: 433 FEVSSTIGLALVISLVGLLTARQPERTQKTVG 464