Pairwise Alignments

Query, 463 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 478 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  119 bits (298), Expect = 2e-31
 Identities = 114/442 (25%), Positives = 195/442 (44%), Gaps = 23/442 (5%)

Query: 11  SSSTSRLLALYSFLFVAWSSILMGVLYFEVSSYLNKLTRHSMLQRQHLFAHMSGKQLDDA 70
           SS + RL    S +      +L  + Y  ++  L+KL R  +  +    AH  G+ LD+ 
Sbjct: 4   SSLSMRLGLTVSLMGAGLVVLLASLAYLALTHELDKLARKGLENKMEQLAHTLGQGLDEH 63

Query: 71  LIASQAFEERSFDAYGLFDSQLNPIGG--------TVRALPPE-LRLDGKIHELERCLDA 121
            I ++          G  +  L  IG         +V A P + L LD    +    L+ 
Sbjct: 64  RITNRPHSLLDL-VMGHDNIYLTIIGARSDAPVLLSVGAKPQQPLLLDVPTGKNLAYLNW 122

Query: 122 DDPRMPRDSCDAVAIKVQDGRWL--VLVRDNGSLFVVTRIILHALLWGISLTLIP-GFAG 178
            D +  R       + +Q G ++  +L  D      +    L + +  + + LI  G   
Sbjct: 123 VDGQGNRILSATRLMPLQGGEYVRVLLSLDRSDDEALLSAYLRSTVIALPMLLILIGMGA 182

Query: 179 WYLLRR--RPLKRIRAIQAQAELIVAGDLTHRLPLSARRDELDMLAAIVNAMLDRIERLM 236
           W+L++R   PL++   + A+   +   DLTHRL L     EL  LA  +N ML R++  +
Sbjct: 183 WWLVQRGLAPLQQFSRVAAK---VSTQDLTHRLSLDNLPKELGELAQGINFMLHRLDAGV 239

Query: 237 HEVKGVCDNIAHDLRTPLTRLRAQLYRIRQQSDVDSAQAEALDQAIGETDTLMARFRGLL 296
            ++    D++AH+LR PLT L  +      +         +L+    E + L      +L
Sbjct: 240 QQLTQFSDDLAHELRAPLTNLMGKAQVTLSRERPSDEYKASLESCTEEMERLSRMVSDML 299

Query: 297 RISELEDRQRRAGFIQLDPHELLVELHDFYLPLAEDGGIQLQLHQPAQLPALHGDRELLF 356
            ++++     RAGF  +   +    + + +   AED  + L L   A +    GDR ++ 
Sbjct: 300 FLAQVSHPAARAGFAPVSLEQEAQRVMELFALSAEDKNVSLTLRGDAWVT---GDRLMIQ 356

Query: 357 EALANLVGNAIKFTPEGGRVRITATQDDSGVHMAIEDSGPGIPEAERTAVLKRFYRSDEG 416
            A++NL+ NAI+ TP    V +     +  V +++ + G GI       + +RFYR+D  
Sbjct: 357 RAISNLLSNAIRHTPRDASVLLLVESYEQSVSLSVGNPGRGIEAHHLPHLFERFYRADNS 416

Query: 417 HRHA--GFGLGLSIVAAIVDLH 436
              A  G GLGL+IV +I+ LH
Sbjct: 417 RARAEGGTGLGLAIVQSIMHLH 438