Pairwise Alignments

Query, 463 a.a., Sensor histidine kinase from Pseudomonas putida KT2440

Subject, 537 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  122 bits (307), Expect = 2e-32
 Identities = 99/341 (29%), Positives = 162/341 (47%), Gaps = 20/341 (5%)

Query: 133 AVAIKVQDGRWLV---LVRDNG-----SLFVVTRIILHALLWGISLTLIPGFAGWYLLRR 184
           +VA+ VQ  + +V   L+  +G     SLF V   IL A    ++LT+     G  L   
Sbjct: 202 SVAVPVQRYKQVVGALLITADGTNIARSLFQVRIAILQAFAVSLALTI-----GVSLYMA 256

Query: 185 RPLKR-IRAIQAQAELIVAGD-LTHRLP-LSARRDELDMLAAIVNAMLDRIERLMHEVKG 241
             + R IR +   AE +  G    H +P LS R+DE+  L+  +  M + + R M  ++ 
Sbjct: 257 GTIARPIRRLALAAERVRHGQGRVHAIPDLSHRKDEIGELSVALKEMTEALWRRMDAIEA 316

Query: 242 VCDNIAHDLRTPLTRLRAQLYRIRQQSDVDSAQAEALDQAIGETDTLMARFRGLLRISEL 301
              ++AH+++ PLT LR+ +    +  D D  +A  +   + +   L      +   S +
Sbjct: 317 FAADVAHEIKNPLTSLRSAVETAARIEDPDK-RARLMSIVLDDVGRLDRLISDISDASHI 375

Query: 302 EDRQRRAGFIQLDPHELLVELHDFYLPLAEDGGIQLQLHQP-AQLPALHGDRELLFEALA 360
           +    RA    +    +L  L + Y    ED G++ ++ +P      + G    L + L 
Sbjct: 376 DAEMSRAETGPVALAAMLDTLAEIYRGTCEDRGLRFEVERPEGDALTVQGIESRLVQVLR 435

Query: 361 NLVGNAIKFTPEGGRVRITATQDDSGVHMAIEDSGPGIPEAERTAVLKRFY-RSDEGHRH 419
           NL+ NA  F+P+GG +R+ A +D   + + +ED GPGIP  +  A+ +RFY    EG + 
Sbjct: 436 NLIANAASFSPDGGLIRLAAHRDGGRIALVVEDQGPGIPANKLDAIFERFYSERPEGEKF 495

Query: 420 AGF-GLGLSIVAAIVDLHGFGLEIGGSELGGARLVLHCPLA 459
               GLGLSI   IV+ HG  +     + GGAR  +  P A
Sbjct: 496 GTHSGLGLSISRQIVEAHGGAIRAENRDEGGARFTVDIPAA 536