Pairwise Alignments

Query, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 795 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 57.0 bits (136), Expect = 3e-12
 Identities = 52/183 (28%), Positives = 71/183 (38%), Gaps = 46/183 (25%)

Query: 444 TTLGHNHRFLGRVQFGGSATNGFKNNIPPSLRFFAGGDQSVRGYDYQTLSPK-------- 495
           T L  N+      + G     G  N +P    ++AGG  SVRG+   TL P+        
Sbjct: 610 TPLSDNYTMRLHTELGYGDGYGSTNGLPFYENYYAGGFNSVRGFKDSTLGPRGTPSRGVG 669

Query: 496 ---------NSDGDRI--GGRYLVAGSVEYQYSLT-----EKWRVATFVDQGNSF----- 534
                    +SD D +  GG  L+ G  E  + L         R + F D GN F     
Sbjct: 670 VTGNQGTVADSDNDPLPFGGNVLIQGGAEILFPLPFVKDQRSLRTSVFWDVGNVFDSKCE 729

Query: 535 --------------NDLELPSLKTGVGFGVRWVSPVGPLRLDLA---KALDDEGGIRLHF 577
                         ND+ L +L + VG GV WV+ +GPL   LA   K  D+       F
Sbjct: 730 QIKNPSGVKSNTQCNDVSLSNLASSVGVGVTWVTALGPLSFALAMPIKKPDNAETQIFQF 789

Query: 578 SMG 580
           S+G
Sbjct: 790 SLG 792



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 47/224 (20%), Positives = 93/224 (41%), Gaps = 10/224 (4%)

Query: 65  GAEEQARKAAQALGYYQAQI-DTEVKPASDADHPPKLIISINPGEPIRLRNVTVR--IEG 121
           G  E+ R      GY    I  T+V    D  H   + +++N GE  ++R+V +   ++ 
Sbjct: 220 GDLERLRSYYLDRGYINMDIASTQVSITPDKKHV-YITVNVNEGEKYKVRDVKLSGDLKV 278

Query: 122 PASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAG 181
           P  ++KA  +     ++  +  +         LI  +    G+     +      D    
Sbjct: 279 PEDQVKALLL-----VQKDQVFSRKLMTTTSELITRRLGNEGYTFANVNGVPTPHDDDHT 333

Query: 182 VADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELVAELNNDLQSSG 241
           V DI  V   G R  +  + F G+T   +++L+R +    G    + L+ +    L+  G
Sbjct: 334 V-DITFVVDPGKRAYVNRINFRGNTKSADEVLRREMRQMEGGWASTYLIDQSKTRLERLG 392

Query: 242 YFEGVRVDAAPTAAVGEEVPVDVHLETRKPRTMGLGLGFSTDVG 285
           +F+ V V+      V ++V V+  +E +   ++   +GF+   G
Sbjct: 393 FFKEVNVETPAVPGVDDQVDVNYAVEEQASGSITASVGFAQSAG 436



 Score = 31.6 bits (70), Expect = 1e-04
 Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 27/206 (13%)

Query: 65  GAEEQARKAAQALGYYQAQIDTEVKPASDADHPPKLIISINPGEPIRLRNVTV------- 117
           G   + ++   A G Y A ++TEV P     +   L ++IN G    ++++ V       
Sbjct: 131 GVRNELQRQYVAQGRYSATVETEVVP--QPRNRVGLKVNINEGTVAAIQHINVVGNTKFA 188

Query: 118 ------RIEGPASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSS 171
                   E   +   +F   D K  R  E+L+     D +RL      R G+ +   +S
Sbjct: 189 DEDLIDLFELKTTNWLSFFKNDDKYAR--EKLS----GDLERLRSYYLDR-GYINMDIAS 241

Query: 172 QRLAVDPQAGVADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELVA 231
            ++++ P      I +    G +Y++  V   GD  + ED ++ ++  +    +  +L+ 
Sbjct: 242 TQVSITPDKKHVYITVNVNEGEKYKVRDVKLSGDLKVPEDQVKALLLVQKDQVFSRKLMT 301

Query: 232 E----LNNDLQSSGYFEGVRVDAAPT 253
                +   L + GY     V+  PT
Sbjct: 302 TTSELITRRLGNEGY-TFANVNGVPT 326