Pairwise Alignments

Query, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 787 a.a., outer membrane protein assembly factor from Pseudomonas putida KT2440

 Score = 58.2 bits (139), Expect = 1e-12
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 34/137 (24%)

Query: 465 GFKNNIPPSLRFFAGGDQSVRGYDYQTLSPKNS-----------------DGDRIGGRYL 507
           G  + +P    + AGG  SVRG+   TL P+++                 D D +GG  L
Sbjct: 632 GSTDGLPFYESYNAGGQGSVRGFKDGTLGPRSTPATGAYSNAGQAYYSDRDTDVLGGNIL 691

Query: 508 VAGSVEYQYSLT-----EKWRVATFVDQGNSFND------------LELPSLKTGVGFGV 550
           + G  EY + L       + R + FVD GN + D            ++L  +   +G GV
Sbjct: 692 ITGGAEYLFPLPFVKDQSQLRSSVFVDAGNVYADTCYLSTTQGCGSVDLAQMAVSLGVGV 751

Query: 551 RWVSPVGPLRLDLAKAL 567
            W SP+GPL   LA  L
Sbjct: 752 TWYSPMGPLSFSLAAPL 768



 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 10/224 (4%)

Query: 65  GAEEQARKAAQALGYYQAQI-DTEVKPASDADHPPKLIISINPGEPIRLRNVTVR--IEG 121
           G  E+ R      GY    I  T+V    D  H   + ++IN GE   +R+V +   ++ 
Sbjct: 220 GDLERLRSYYLDRGYINMDIASTQVSITPDKKHV-YITVNINEGEKYTVRDVKLSGDLKV 278

Query: 122 PASEMKAFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAG 181
           P  ++K+  +     ++PG+  +         LI  +    G+     +      D Q  
Sbjct: 279 PEDQVKSLLL-----VQPGQVFSRKVMTTTSELITRRLGNEGYTFANVNGVPQPND-QDH 332

Query: 182 VADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELVAELNNDLQSSG 241
             DI  V   G R  +  + + G+T  ++++L+R +    G    + L+ +    L+  G
Sbjct: 333 TVDIMFVVDPGKRAYVNRINYRGNTKTEDEVLRREMRQMEGGWASTYLIDQSKTRLERLG 392

Query: 242 YFEGVRVDAAPTAAVGEEVPVDVHLETRKPRTMGLGLGFSTDVG 285
           +F+ V V+        ++V V+  +E +   ++   +GF+   G
Sbjct: 393 FFKEVNVETPQVPGTDDQVDVNYSVEEQASGSITASVGFAQSAG 436



 Score = 36.6 bits (83), Expect = 4e-06
 Identities = 40/179 (22%), Positives = 76/179 (42%), Gaps = 22/179 (12%)

Query: 65  GAEEQARKAAQALGYYQAQIDTEVKPASDADHPPKLIISINPGEPIRLRNVTV------- 117
           G   + ++   A G Y A++D EV P     +   L I IN G    ++++ +       
Sbjct: 131 GVRNELQRQYVAQGRYSAEVDAEVVP--QPRNRVALKIKINEGTVAAIQHINIVGNNVFD 188

Query: 118 -RIEGPASEMK-----AFRVPDSKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSS 171
               G   E+K     +F   D K  R  E+L+     D +RL      R G+ +   +S
Sbjct: 189 DETLGQLFELKTTNWLSFFKNDDKYAR--EKLS----GDLERLRSYYLDR-GYINMDIAS 241

Query: 172 QRLAVDPQAGVADIELVYQSGPRYRLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELV 230
            ++++ P      I +    G +Y +  V   GD  + ED ++ ++  +PG  +  +++
Sbjct: 242 TQVSITPDKKHVYITVNINEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQPGQVFSRKVM 300