Pairwise Alignments

Query, 583 a.a., conserved exported protein of unknown function from Pseudomonas putida KT2440

Subject, 810 a.a., outer membrane protein assembly factor BamA from Escherichia coli ECRC101

 Score = 66.2 bits (160), Expect = 5e-15
 Identities = 126/588 (21%), Positives = 223/588 (37%), Gaps = 99/588 (16%)

Query: 78  GYYQAQIDTEVKPASDADHPPKLIISINPGEPIRLRNVTV--RIEGPASEMKAFRVPDSK 135
           GY +  ID+     +       + ++I  G+  +L  V V   + G ++E++        
Sbjct: 234 GYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGNLAGHSAEIEQLT----- 288

Query: 136 ALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAGVADIELVYQSGPRY 195
            + PGE  N       +  I+    RYG+   R  S     D    V  + +   +G R+
Sbjct: 289 KIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKTVK-LRVNVDAGNRF 347

Query: 196 RLGAVTFGGDTPLDEDLLQRMVSFKPGTPYDSELVAELNNDLQSSGYFEGVRVDAAPTAA 255
            +  + F G+    + +L+R +    G    S+LV +    L   G+FE V  D      
Sbjct: 348 YVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRLGFFETVDTDTQRVPG 407

Query: 256 VGEEVPVDVHLETRKPRTMGLGLGFSTDVGPRGKA-----NW--TRHWVNPQGHSYGWET 308
             ++V V   ++ R   +   G+G+ T+ G   +A     NW  T + V   G    ++T
Sbjct: 408 SPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWLGTGYAVGINGTKNDYQT 467

Query: 309 --ELSAPR-----QNVGLWYDIPLDPPLTDKLRFAGGYQNEELAGTDTLS------KLLT 355
             ELS          V L   +  +    D    +  Y N+      TL         L 
Sbjct: 468 YAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLS-DYTNKSYGTDVTLGFPINEYNSLR 526

Query: 356 VGPEW-HSKLPSGWQRVISLKYQREEYRLGDDSGLS----NLLMPGVSFSFLRSDNRID- 409
            G  + H+ L +   +V   +Y    Y +G+    S    +      +F++  + N++D 
Sbjct: 527 AGLGYVHNSLSNMQPQVAMWRYL---YSMGEHPSTSDQDNSFKTDDFTFNYGWTYNKLDR 583

Query: 410 ---PHNGYRLQFDVQGAKEGLVSDTNLLHGNVLLKGLTTLGHNHRF--LGRVQFG-GSAT 463
              P +G R+    +    G  SD       +       +  +H++  LGR ++G G   
Sbjct: 584 GYFPTDGSRVNLTGKVTIPG--SDNEYYKVTLDTATYVPIDDDHKWVVLGRTRWGYGDGL 641

Query: 464 NGFKNNIPPSLRFFAGGDQSVRGYDYQTLSPK--------------------NSDG---- 499
            G    +P    F+AGG  +VRG+   T+ PK                      DG    
Sbjct: 642 GG--KEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNYDPDYDYECATQDGAKDL 699

Query: 500 ----DRIGGRYLVAGSVEY---------QYSLTEK----WRVATFVD------QGNSFND 536
               D +GG  +   S+E+         +Y+ + +    W + T  D      Q + + D
Sbjct: 700 CKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWDMGTVWDTNWDSSQYSGYPD 759

Query: 537 LELPS-LKTGVGFGVRWVSPVGPLRLDLA---KALDDEGGIRLHFSMG 580
              PS ++   G  ++W+SP+GPL    A   K  D +   +  F++G
Sbjct: 760 YSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDKAEQFQFNIG 807



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 17/115 (14%)

Query: 134 SKALRPGEQLNHGHYEDAKRLIQNQASRYGFFSGRFSSQRLAVDPQAGVADIELVYQSGP 193
           S  +R G+ +N    ED    I     R  F +G F   R+  D         L+ Q   
Sbjct: 45  SMPVRTGDTVND---EDISNTI-----RALFATGNFEDVRVLRDGDT------LLVQVKE 90

Query: 194 RYRLGAVTFGGDTPLDEDLLQRMV---SFKPGTPYDSELVAELNNDLQSSGYFEG 245
           R  + ++TF G+  + +D+L++ +     + G   D   +A++   L+   Y  G
Sbjct: 91  RPTIASITFSGNKSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVG 145