Pairwise Alignments

Query, 250 a.a., putative Transmembrane regulator PrtR from Pseudomonas putida KT2440

Subject, 241 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 55.8 bits (133), Expect = 8e-13
 Identities = 61/227 (26%), Positives = 90/227 (39%), Gaps = 13/227 (5%)

Query: 6   PSDDELHAFVDERLEPVRRAEVQAWLAANPQAAARVEGWRADARRLRTALAGLGELPGAA 65
           PS+ EL A+VD +L+P RR  V+  L+  P  AA+V G  +    LR        LP   
Sbjct: 5   PSEIELMAYVDGQLDPGRRFAVETRLSRRPDLAAQVMGDLSARTGLRLLAQDRAPLPETM 64

Query: 66  QLDLGQLR-RQLRQRRQRRWAAAAVVMLALGVGGLGGWQVRDATLARVDLPMADAVQAHR 124
              +  L     R RR    A   + +LA     L    VRD   A V     DA  +HR
Sbjct: 65  AAQVSALHPPAARHRRFAIGAGGGLALLAASFVAL--LMVRDGPPAYV----VDAATSHR 118

Query: 125 LFAGSEALDIQASDPG-QLRDWLGRHFSRVGQLPDLAGYGFKPVGARLLSNEQGPAALLV 183
           +      +  Q   P    R+ L      +  LP      ++    +L   E+ PA L+ 
Sbjct: 119 VAMIRARMQGQIESPSFDPREILASTHIDIPGLP----ADWRVTDVQLFPGERTPALLIA 174

Query: 184 FEDGKGQRISLFLRSPGNLYRRMPDGQRVDGQLEARYWSHGAYNFAL 230
               +G+ +S++           PD  R +G     YW  G  ++AL
Sbjct: 175 LRTPEGRDLSIYAMHRRTDAPERPDSVR-EGAQSVAYWRRGDMSYAL 220