Pairwise Alignments

Query, 250 a.a., putative Transmembrane regulator PrtR from Pseudomonas putida KT2440

Subject, 254 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 69/235 (29%), Positives = 103/235 (43%), Gaps = 24/235 (10%)

Query: 1   MTRLIPSDDELHAFVDERLEPVRRAEVQAWLAANPQAAARVEGWRADARRLRTALAGLGE 60
           M  L  ++ ELHA+VD++L+ + R EV  +L  NP  AARV       R    ALA   E
Sbjct: 1   MAELTITECELHAYVDDQLDAMGRLEVADYLVRNPDVAARVLA-DLSVRDAMRALAERDE 59

Query: 61  LP------GAAQLDLGQLRRQLRQRRQR---RWAAAAVVMLALGVGGLGGWQVRDATLAR 111
            P       +A+   G L R    RR       AA  V  +ALGVG L        T   
Sbjct: 60  QPVPQRLHDSARKVEGALHRSRLFRRLSGGLAMAAGIVAAVALGVGKLNMGVA--PTAQA 117

Query: 112 VDLPMADAVQAHRLFAGSEAL----DIQASDPGQLRDWLGRHFSRVGQLPDLAGYGFKPV 167
           + + + +A+ +H+       +    +I   DP  +R     H + V  LP     G++ +
Sbjct: 118 MPVFIEEALMSHKTALVRSHMKSQPEIPHFDPADVRS--ATHIN-VPVLP----AGWRVL 170

Query: 168 GARLLSNEQGPAALLVFEDGKGQRISLFLRSPGNLYRRMPDGQRVDGQLEARYWS 222
             +L  ++ GP+  LV + G+   +SLF           P  Q VDG+  A YW+
Sbjct: 171 DVQLFPSDYGPSLQLVIDAGEKAPVSLFAARAVTGLPETPRTQVVDGETIA-YWA 224