Pairwise Alignments

Query, 173 a.a., putative ECF sigma factor PrtI from Pseudomonas putida KT2440

Subject, 168 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score = 99.4 bits (246), Expect = 3e-26
 Identities = 70/159 (44%), Positives = 88/159 (55%), Gaps = 6/159 (3%)

Query: 16  LRRFAVWLTREPGSADDLVQATVERALSRRDQQRDADALRAWLFTILYRQFLDGKRRERL 75
           LRR+A  L+ +   ADDLVQ  +ERALSR    R    LRAWLFTIL   ++D  RR ++
Sbjct: 15  LRRYARALSGDVTQADDLVQDCLERALSRLALWRRDSNLRAWLFTILRHVWIDELRRRKV 74

Query: 76  HARWLSWFGRNEHDDEPVGDNLETIVLAQADL-QAFARLTAEQRALLLLVSIEGLSYKEA 134
                   G ++  D       +   LA  DL  A A L  EQR  +LLV +EGL+Y E 
Sbjct: 75  RPEH---GGMDDAMDSAAAAPSQMDRLAVRDLVAALALLAPEQRETVLLVGLEGLTYAEV 131

Query: 135 AQALGIPIGTVMSRLSRARNALRELTEGNPQPPALRRLK 173
           A   G+P+GTVMSRL R R+ L  L  G     ALRR+K
Sbjct: 132 AGVTGVPVGTVMSRLKRGRDRLALLMHGG--EAALRRVK 168