Pairwise Alignments

Query, 173 a.a., putative ECF sigma factor PrtI from Pseudomonas putida KT2440

Subject, 188 a.a., RNA polymerase sigma factor from Agrobacterium fabrum C58

 Score = 89.0 bits (219), Expect = 4e-23
 Identities = 61/160 (38%), Positives = 87/160 (54%), Gaps = 20/160 (12%)

Query: 10  RELLA---RLRRFAVWLTREPGSADDLVQATVERALSRRDQQRDADALRAWLFTILYRQF 66
           RE+LA    LR FA+ L R    ADDLVQ T+ +A +++D  +    +RAWL TIL  +F
Sbjct: 14  REMLAALPNLRAFAISLIRSRDRADDLVQDTIMKAWAKQDSFQPGTNMRAWLVTILRNEF 73

Query: 67  LDGKRRERLHARWLSWFGRNEHDDEPVGDNLETIVLAQ---ADLQAF----ARLTAEQRA 119
               R+           GR   D + V  +  ++   Q    DLQ F    A+L  +QR 
Sbjct: 74  YSQIRKS----------GREVQDTDGVYTSRLSVPPEQHGSVDLQDFRTALAKLPDDQRE 123

Query: 120 LLLLVSIEGLSYKEAAQALGIPIGTVMSRLSRARNALREL 159
            +LL+   G +Y+EAA+  G P+GT+ SR+SRAR  L+EL
Sbjct: 124 AILLIGASGFAYEEAAEICGCPVGTIKSRVSRARLRLQEL 163