Pairwise Alignments

Query, 409 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 410 a.a., Tetracycline resistance, MFS efflux pump => Tet(C) from Variovorax sp. SCN45

 Score = 87.8 bits (216), Expect = 5e-22
 Identities = 105/381 (27%), Positives = 154/381 (40%), Gaps = 46/381 (12%)

Query: 44  VALIGPIARQL-------GMATWQAGAAVTVAGVVWVLLARPWGRAADRLGRRRILLLGS 96
           ++L+ PI   L       G   W+ GA +++  ++  L A   G  +DR GRR +LL+  
Sbjct: 33  ISLVMPIVPSLLREVGHTGDLGWRFGAFLSLYALMQFLCAPVLGALSDRFGRRPVLLISV 92

Query: 97  AGFTLAYWLLCLFVEGALRWMPGATLAFIGLMIARGCIGAFYAAIPVGYNALIADHVEPQ 156
           AG  +      LF+  A    P   + F+G  IA G  GA  A      +A IAD     
Sbjct: 93  AGSAID----ALFMAFA----PSLWMLFLGRAIA-GMTGASTAVA----SAAIADLTPEN 139

Query: 157 RRARAMASLGAANAVGLVVGPALAALLARHSLSLPFHIMSLLPATAFLVLFFTLKPQALP 216
           +RAR    +GA   +G + GPA+  +L  + + LPF   ++L    FLV    L+    P
Sbjct: 140 QRARWFGRMGACFGLGFIAGPAIGGVLGDYGVRLPFVAAAVLNGLTFLVGLLVLRESRPP 199

Query: 217 ------------HSHAPSPVRLNDPRLRRPLLVAFSAMLSV-TVSQIIVGFFALDRLHLG 263
                       H  AP     + P L  PLL  F  ++ V  V+      +  DR    
Sbjct: 200 ALASQPFDRGVLHPLAPLRWATSFPAL-LPLLGVFLLLVLVGEVAGTTWVIYGQDRY--- 255

Query: 264 PAEAAQAAGIALTTVGVALMLAQVILR---QLEWPPLKMIRVGATVSALGFACGSLATTA 320
            A      G++L   G+   L Q  +       W     I VG      G+A  + AT  
Sbjct: 256 -AWNGTMVGLSLAVFGLLHALVQGFVAGPLVERWGERAAIAVGIIADGTGYALIAFATQG 314

Query: 321 PWLWACYFVAAAGMGFVFPAFSALAANAMQASEQGATAGSIGAAQGMGAVIGP-LAGTLV 379
            W+           G   PA  A  +  +  ++QG   G + +   + AV GP L   L 
Sbjct: 315 -WMAIAMLPLLCMGGVCAPALQATLSARVGQAQQGRLQGVLASITSLAAVFGPLLISPLY 373

Query: 380 YALDPRLP---FLAVAVLLLL 397
           +A   R P   +LA A L LL
Sbjct: 374 FAFRTRFPGIVWLAGASLYLL 394