Pairwise Alignments

Query, 409 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 405 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 75/365 (20%), Positives = 142/365 (38%), Gaps = 38/365 (10%)

Query: 56  MATWQAGAAVTVAGVVWVLLARPWGRAADRLGRRRILLLGSAGFTLAYWLLCLFVEGALR 115
           +  +  G   ++  +  ++    WG+ +DR GR+ ++++G  GF +            ++
Sbjct: 48  LINFHIGLLTSIYPLFQLIFVVVWGKLSDRYGRKPVIIIGLIGFVI------------MQ 95

Query: 116 WMPGATLAFIGLMIARGCIGAFYAAIPVGYNALIADHVEPQRRARAMASLGAANAVGLVV 175
            + G   +   L IAR   G F +++    NA ++D    +RR + MA  G A + G++ 
Sbjct: 96  LLTGLATSLTMLYIARIFGGVFTSSVIPVSNAYLSDITSEKRRTKIMAWSGVAISSGVIF 155

Query: 176 GPALAALLARHSL--------------SLPFHIMSLLPATAFLVLFFTLKPQALPHSHAP 221
           GP +   L++  L              S PF   +LL     +++   LK     H    
Sbjct: 156 GPVIGGFLSQSDLHFEYAIGQLHLGRFSTPFLFAALLGFIVLVIVVKCLKNSVRIHKFTT 215

Query: 222 S--PVRLNDPRLRRPLL-VAFSAMLSVTVSQIIVGFFALDRLHLGPAEAAQAAGIALTTV 278
                R +  +    LL ++F     VT+ + +   +  D L       +   GI     
Sbjct: 216 QKFTFRFSFSQYFLVLLALSFVIQFVVTLFETVFSIYGKDELGFN----SNQVGIGFILC 271

Query: 279 GVALMLAQVILRQLEWPPL---KMIRVGATVSALGFACGSLATTAPWLWACYFVAAAGMG 335
           G  + + Q +        L   K I  G  +S +             ++    V AAG  
Sbjct: 272 GSIMAVLQPVFASYGEKILSTKKQIGFGLFISGISLIAFPFFKNEFVVYGLIVVFAAGGA 331

Query: 336 FVFPAFSALAANAMQASEQGATAGSIGAAQGMGAVIGPLAGTLVYALDPRLPFL-AVAVL 394
            V P   + A + +  +  G       +   +G ++GP+ GT +       PFL A +++
Sbjct: 332 MVTPNLLS-AVSLLSKTNTGRNISIQSSTNSVGQILGPVLGTWLVTGGFYYPFLIAGSII 390

Query: 395 LLLVG 399
           L+ +G
Sbjct: 391 LVAIG 395



 Score = 28.1 bits (61), Expect = 5e-04
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 160 RAMASLGAANAVGLVVGPALAALLARHSLSLPFHIMSLLPATAFLVLFFTLKP 212
           R ++   + N+VG ++GP L   L       PF I   +   A   L F  KP
Sbjct: 351 RNISIQSSTNSVGQILGPVLGTWLVTGGFYYPFLIAGSIILVAIGFLIFLKKP 403