Pairwise Alignments

Query, 409 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 401 a.a., Arabinose efflux permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 51.6 bits (122), Expect = 4e-11
 Identities = 73/314 (23%), Positives = 120/314 (38%), Gaps = 26/314 (8%)

Query: 75  LARPW-GRAADRLGRRRILLLGSAGFTLAYWLLCLFVEGALRWMPGATLAFIGLMIARGC 133
           L+RP+ G+ ADR+GR  +++ G AG  L   LL   + G             G +  R  
Sbjct: 62  LSRPFSGKLADRIGRVPVMIFG-AGVCLVVSLLYPLISGVA-----------GFLCLRFL 109

Query: 134 IGAFYAAIPVGYNALIADHVEPQRRARAMASLGAANAVGLVVGPALAALLARHSLSLPFH 193
            G      P G +A +AD V   RR  AM      +++G+  GPAL   +A      P  
Sbjct: 110 HGFSTGFTPTGISAYVADIVPFNRRGEAMGLQSLFSSLGMAAGPALGGYIASIHGITPLF 169

Query: 194 IMSLLPATAFLVLFFTLKPQALPHSHA-------PSPVRLNDPRLRRPLLVAFSAMLSVT 246
             S   A   ++L   LK + +P + A            L +  +  P  V F + LS  
Sbjct: 170 YCSSGVALVSILLLIRLK-ETVPETEAFHVGHFKLKKDELFEKSVLSPCFVLFFSYLSFG 228

Query: 247 VSQIIVGFFALDRLHLGPAEAAQAAGIALTTVGVALMLAQVILRQLEWPPLKMIRVGATV 306
           +   I+  F+   L++   +    A   L+++ + L+  +   R    P LK        
Sbjct: 229 IILTIIPDFSAS-LNIA-NKGIFFAVFTLSSLAIRLLAGRASDRYGRIPVLK---AATFC 283

Query: 307 SALGFACGSLATTAPWLWACYFVAAAGMGFVFPAFSALAANAMQASEQGATAGSIGAAQG 366
            A+     + + T   L     +    +G   P  +A   +   +  +G    ++  A  
Sbjct: 284 LAMAMTATAFSHTKEMLVFSGILFGFSLGMTSPTIAAWTIDLSLSKFRGRGLATMYIALE 343

Query: 367 MGAVIGPLAGTLVY 380
            G  IG L    VY
Sbjct: 344 AGIGIGALGSGWVY 357



 Score = 24.6 bits (52), Expect = 0.005
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 6/79 (7%)

Query: 328 FVAAAGMGFVFPAFSALAANAMQASEQGATAGSIGAAQGMGAVIGPLAGTLVYALDPRLP 387
           F+     GF     SA  A+ +  + +G   G       +G   GP  G  + ++    P
Sbjct: 108 FLHGFSTGFTPTGISAYVADIVPFNRRGEAMGLQSLFSSLGMAAGPALGGYIASIHGITP 167

Query: 388 F------LAVAVLLLLVGL 400
                  +A+  +LLL+ L
Sbjct: 168 LFYCSSGVALVSILLLIRL 186