Pairwise Alignments

Query, 409 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 414 a.a., Tetracycline resistance protein, class C from Azospirillum sp. SherDot2

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 105/389 (26%), Positives = 161/389 (41%), Gaps = 46/389 (11%)

Query: 38  MSMMAFVALIGPIARQLGMATWQAGAAVTVAGVVWVLL----ARPWGRAADRLGRRRILL 93
           ++M   + ++  +  +   A  QAG        +W L+    +   G  +DR GRR ++L
Sbjct: 23  VAMGIVIPVLPALIEEFAGADAQAGTINGALVALWALMQFFSSPVIGSLSDRFGRRPVIL 82

Query: 94  LGSAGFTLAYWLLCLFVEGALRWMPGATLAFIGLMIARGCIGAFYAAIPVGYNALIADHV 153
           L + G    Y L+   V   L W          L++ R   G   ++    + A +AD  
Sbjct: 83  LSALGLAADYVLMA--VAPNLWW----------LVLGRAVAGITSSSFTTVF-AYMADVT 129

Query: 154 EPQRRARAMASLGAANAVGLVVGPALAALLARHSLSLPFHIMSLLPATAFLVLFFTLKPQ 213
            P++RARA   +GAA + G + GP L  +L   S   PF    LL   AFL     L P+
Sbjct: 130 PPEQRARAYGLIGAAFSAGFIAGPLLGGVLGEISPRAPFWGAGLLSGLAFLYGLAVL-PE 188

Query: 214 ALPHSH--APSPVRLN----------DPRLRRPLLVAFSAMLSVTVSQIIVGFFALDRLH 261
           +LP     A S  R N           P L    +V F   +S  V   +   +A  R  
Sbjct: 189 SLPQESRMAFSWRRANPFGAFQLLRSHPELSGLAMVNFMLHVSHQVFPAVFVLYAAHRY- 247

Query: 262 LGPAEAAQAAGIALTTVGVALMLAQ--VILRQLEW-PPLKMIRVGATVSALGFACGSLAT 318
                +A   G+ L+ VG   ML Q  V+ R ++W      + VG    A+G AC  LA 
Sbjct: 248 ---GWSAWDVGLLLSMVGALDMLVQGLVVSRVVKWLGDRGTMIVGLFGGAVGLACMGLAP 304

Query: 319 TAPWLWACYFVAAAGMGFVFPAFSALAANAMQASEQGATAGSIGAAQGMGAVIGPLAGTL 378
              W +A   V  A  G   P   +L    + +SEQG   G+  +   +  ++ P+    
Sbjct: 305 DGGW-FAFAIVPNALWGLAMPTIQSLMTQRVGSSEQGQLQGANMSVASVAGILSPVFFGT 363

Query: 379 VYA----LDPRLPF----LAVAVLLLLVG 399
           VY+    +DP  P       +A L++L G
Sbjct: 364 VYSASVGIDPLFPHPGAAFLIAALVMLAG 392



 Score = 40.0 bits (92), Expect = 1e-07
 Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 10/114 (8%)

Query: 306 VSALGFACGS-LATTAPWLWACYFV-AAAGM-GFVFPAFSALAANAMQASEQGATAGSIG 362
           +SALG A    L   AP LW      A AG+    F    A  A+     ++    G IG
Sbjct: 83  LSALGLAADYVLMAVAPNLWWLVLGRAVAGITSSSFTTVFAYMADVTPPEQRARAYGLIG 142

Query: 363 AAQGMGAVIGPLAGTLVYALDPRLPFLAVAVLLLLVGLW-------PMPREQRV 409
           AA   G + GPL G ++  + PR PF    +L  L  L+        +P+E R+
Sbjct: 143 AAFSAGFIAGPLLGGVLGEISPRAPFWGAGLLSGLAFLYGLAVLPESLPQESRM 196