Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  192 bits (487), Expect = 1e-53
 Identities = 117/340 (34%), Positives = 182/340 (53%), Gaps = 11/340 (3%)

Query: 13  ALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNGEMARIQVM 72
           A LAL ++ A +A+Q+  V  GGA Q+AQ +AI  P     G  + Q         ++  
Sbjct: 12  AALALSVATA-SAEQITFVSQGGAYQEAQTKAILNPAAKLLGITINQDSAPDAWPVLKTQ 70

Query: 73  ADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQDCGSAALVWSVAI 132
           A TG   WDV+       +RG D+G+ E+LD+ ++  AA +          A   +S  +
Sbjct: 71  AATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKIPTAASMPAQYKTPYSVAYEFYSSVL 130

Query: 133 AYDRSKLA-QAPASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGVKVEDVYRVLSTPA 191
           AY++ K A +AP +WADFWDV  +PG R LR      +E ALLADGV  + +Y     P 
Sbjct: 131 AYNKKKFASKAPQTWADFWDVKAFPGTRALRNHPQATMEAALLADGVPADKLY-----PL 185

Query: 192 GVERAFAKLSELKPHIQ-WWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQGSPLAVVWP 250
            V+RAF KL ++KPHI  WW +GAQ AQ LA G+V M   ++GR+A   ++G+P++  + 
Sbjct: 186 DVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRVAAVMKEGAPVSFTFN 245

Query: 251 GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTNTQAAA--RLDPAL 308
             L       I+KG+ +++ A + +  A  PD Q  +   I YGP N  A A  ++ P  
Sbjct: 246 QGLLQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYATGKISPER 305

Query: 309 ANWVPTSPQNLQGALAMNVEFWVD-HGEELEQRFNAWASK 347
           A  +P++P+N    + ++  +W    GE+  +R+  +  K
Sbjct: 306 ATQMPSAPENAAKQVLVSQAWWASPAGEDAIKRWAGFVQK 345