Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  354 bits (909), Expect = e-102
 Identities = 171/337 (50%), Positives = 229/337 (67%), Gaps = 3/337 (0%)

Query: 13  ALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNGEMARIQVM 72
           AL  +G + A A   + VV +GGA + AQ +A + P+ +    +++  EYNGEMA+++ M
Sbjct: 11  ALSLMGATQAMAGPDLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAGEYNGEMAKVKAM 70

Query: 73  ADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQDCGSAALVWSVAI 132
            DT +V WD+V++E P+L RGCDE ++E LD +  G+ A+ +  A Q CG    VWS  +
Sbjct: 71  VDTKSVSWDLVEVESPELSRGCDEDMFEPLDPKLFGNTADYVKGAIQPCGVGFFVWSTVL 130

Query: 133 AYDRSKLAQAPASWADFWDVDKYPGKRGLRKRAVYNLEFALLADGVKVEDVYRVLSTPAG 192
           AY+  KLA AP SWADFWD  K+PGKRGLRK A Y LEFAL+ADGV  +DVY+VL+   G
Sbjct: 131 AYNADKLASAPTSWADFWDTKKFPGKRGLRKGAKYTLEFALMADGVAPKDVYKVLAGKDG 190

Query: 193 VERAFAKLSELKPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQGSPLAVVWPGS 252
            +RAF KL ELKP IQWW+AGAQP Q+LA+GDVVM+S Y+GRIA A Q+ S L VVW G 
Sbjct: 191 QDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIA-AVQKESNLKVVWNGG 249

Query: 253 LYGMDYWAIIKG--SRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTNTQAAARLDPALAN 310
           +Y  D WAI KG      + AK+ IA++ QP  Q  Y + I YGP NTQA   L   +  
Sbjct: 250 IYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQAVPLLAKDVLK 309

Query: 311 WVPTSPQNLQGALAMNVEFWVDHGEELEQRFNAWASK 347
            +PT+P+N+   + ++V FW D+GE+LEQRFN+WA+K
Sbjct: 310 DMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346