Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 75.5 bits (184), Expect = 2e-18
 Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 17/312 (5%)

Query: 8   TGLCAALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNGEMA 67
           +GL AALLA G ++A  A+++VV  +GG+  +         F  + G+++     +    
Sbjct: 11  SGLAAALLA-GAASAAQAEELVVGIFGGSFAEDSKTCHIASFEKKTGAKVALKLGSSSQF 69

Query: 68  RIQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQDCGS--AA 125
              + A  G  D+DVV I+     +  +E + E +D  +L +AAE+ P A    G     
Sbjct: 70  AASIRATGGKSDFDVVYIDNSLASQLKNEKLLETIDKSKLANAAEVSPRALDKDGQYVVF 129

Query: 126 LVWSVAIAYDRSKLAQAPASWADFWDVDKYPGKRGLRK-RAVYNLEFALLADGVKVEDVY 184
           +  +  I YD  ++   P SWAD     +Y G+  +         +F +  + +K     
Sbjct: 130 MTGATVIVYDTKQIKTPPTSWADL-AKPEYDGRLAIGDISGTSGSQFLMALNRMKG---- 184

Query: 185 RVLSTPAGVERAFAKLSEL-KPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQGS 243
               T A ++  FA +  + K  +  +    Q        ++     Y  R   A  +G 
Sbjct: 185 ---GTLANMDAGFAAIKPIAKSSVTLYTQADQIVSLFERQEIAAAVWYPDRAGSAIDKGL 241

Query: 244 PLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTNTQAA 301
           PLA+V+P  G++  +    I KG++    A + I      + Q  + ++   GP NTQ  
Sbjct: 242 PLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKEGQTCFAERKYAGPVNTQ-- 299

Query: 302 ARLDPALANWVP 313
            +L    A  VP
Sbjct: 300 VKLSDKAAKIVP 311