Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score =  192 bits (489), Expect = 8e-54
 Identities = 117/350 (33%), Positives = 179/350 (51%), Gaps = 12/350 (3%)

Query: 1   MQLYPRVTG-LCAALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQ 59
           M L  RVT  L A+LL L    A AA  +  V +GG  Q AQ EA   PF      +++Q
Sbjct: 1   MLLSKRVTAVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQ 60

Query: 60  SEYNGEMARIQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQ 119
                +  +++ M ++GNV WDVV +E    +R   EG+ E LD+ ++    ++ P    
Sbjct: 61  DGPT-DYGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIKRD-KIDPRFVS 118

Query: 120 DCGSAALVWSVAIAYDRSKL-AQAPASWADFWDVDKYPGKRGLRKRAVYN-LEFALLADG 177
           D G  +  +S  + Y+  KL A  P  W   +D   YPGKR L K      LE ALLADG
Sbjct: 119 DHGVGSFFFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADG 178

Query: 178 VKVEDVYRVLSTPAGVERAFAKLSELKPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAV 237
           V  + +Y     P  ++RAF KL  +K  I WW  GAQ  Q LA+G+  +   ++GR+  
Sbjct: 179 VAPDKLY-----PLDLDRAFKKLDTIKQDIVWWGGGAQSQQLLASGEASLGQFWNGRVYA 233

Query: 238 AAQQGSPLAVVWPGSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTN 297
             Q G+P+ V W  +L   D+  I KG+++ + A + +A A+  + Q  +  +  Y P N
Sbjct: 234 LQQDGAPVGVSWKQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVN 293

Query: 298 TQAAARLDPALANWVPTSPQNLQGALAMNVEFWVDHGEELEQRFNAWASK 347
             + A+LD  LA  +PT+    Q  + ++  +W  +G+ +  R+N W  K
Sbjct: 294 VDSVAKLDKDLAPNLPTA--YAQDQVTLDFAYWAKNGQAIAARWNEWLVK 341