Pairwise Alignments

Query, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 50.8 bits (120), Expect = 5e-11
 Identities = 86/343 (25%), Positives = 129/343 (37%), Gaps = 58/343 (16%)

Query: 14  LLALGLSNAQAAQQMVVVGYGGAGQKAQ-----DEAIFKPFVAQDGSQLIQSEYNGEMAR 68
           LLA G S AQAA+    VG G   +         E     F    G ++I   ++G    
Sbjct: 12  LLASGASLAQAAE----VGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDG-YET 66

Query: 69  IQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQDCGSAALVW 128
           +Q    TG   +D+V +    +      G+++ LD Q+L     L      D        
Sbjct: 67  VQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQG----- 121

Query: 129 SVAIAYDRSKLAQAPASWADF---WDVDKYPGKRGLRKRAVYNLEF-----ALLAD-GVK 179
                YD      AP +W      ++VDK   +          + F     +  AD GV 
Sbjct: 122 -----YDPGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVT 176

Query: 180 VEDVYRVL--------------STPAGVERAFAKLSELKPHIQWWDAGAQPAQWLAAGDV 225
           + D    +              ++PA ++ A   L  ++P+I+ +D+       L  GDV
Sbjct: 177 LMDAPTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDS-VNYLTSLPNGDV 235

Query: 226 VMTSTYSGRIAVA------AQQGSPLAVVWP--GSLYGMDYWAIIKGSRHVDQAKRLIAY 277
            +  T+SG  A A      A++   L+   P  GSL   D   I K + H   A R I +
Sbjct: 236 CLALTWSGDYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEF 295

Query: 278 ANQPDTQVRYVQQIPYGPTNTQAAA------RLDPALANWVPT 314
             QP T  +    I Y  +N  A A      R DPA+    PT
Sbjct: 296 LLQPQTMAKVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPT 338