Pairwise Alignments

Query, 199 a.a., Transcriptional regulator, Cro/CI family from Pseudomonas putida KT2440

Subject, 199 a.a., Helix-turn-helix motif protein from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  100 bits (248), Expect = 2e-26
 Identities = 63/183 (34%), Positives = 99/183 (54%), Gaps = 6/183 (3%)

Query: 20  LGTRIRGLRKRRGMTLAELAAHSELTAGYISQLERNLSYPSIPALFNIARSLGVTIQWFF 79
           +G R++ +RK +G++  ELA  + +T   IS +E+N   PSI +L  +   + +++  FF
Sbjct: 20  VGERLQSIRKLKGLSQRELAKRAGVTNSTISMIEKNSVSPSISSLRKVLGGIPMSMVEFF 79

Query: 80  ASEATTAPEDQGYVVRRNSRLSVHYEDGIVDQLLTPQPN--RQLEMLHSRFPPGTYS-QQ 136
           + E+   PE+   VV + S L +   DG V   L  + +  R +  L   +PPG  + ++
Sbjct: 80  SEESV--PENAAQVVYKASEL-IDISDGAVTMKLVGKSHQGRAIAFLTETYPPGADTGEE 136

Query: 137 SYSHDGEEAGYLLSGTFELWVGERYFQLSEGDSFSFSSQEPHRYGNPGEVDAVVIWVITP 196
              H+GEE G L+ G  EL VG   + L  GDS+ F S  PHR+ NP +V A +I   TP
Sbjct: 137 MLVHEGEETGILVEGRLELVVGLDTYVLEAGDSYYFESTRPHRFRNPFDVPARLISAATP 196

Query: 197 PTF 199
             F
Sbjct: 197 ANF 199