Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 294 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  162 bits (409), Expect = 1e-44
 Identities = 105/292 (35%), Positives = 152/292 (52%), Gaps = 5/292 (1%)

Query: 1   MQDLNDLFYFARVVEAGGFAAAGRQLGIPKSRLSRRIAELEERLGTRLLQRTTRQLKLTA 60
           M  +  L  F  VVEAG F AA  +LG+     S+ +A+LE+ LG RLL R++R L LT 
Sbjct: 1   MDRMTSLRVFREVVEAGSFVAAAERLGMSPPMASKHVAQLEKSLGARLLHRSSRHLSLTE 60

Query: 61  VGERYLHHCQAMLLEAEAADETVASMSSEPRGRLRVSCPVALAHAFLPDVISRFLEQYPL 120
            G  +    +  L   +AA+  +      PRG+L+VS PV  A      +++ +  QYP 
Sbjct: 61  AGTAWYEQSRRALDLLDAAEVAIGQTHDTPRGQLKVSAPVWCATPRFARMLADYRAQYPE 120

Query: 121 VQLDMVLLNRRVDLISEGIDVALRVRDLGDEDPALVTRRLRQAQMQLVAAPGFADHIRE- 179
           V +DM L NR+VDL ++G D+ALR     +  PAL+ R L      LV  P + + +   
Sbjct: 121 VLVDMHLENRKVDLAADGYDLALRATQ--EPSPALIARPLCSVPFHLVGTPAYVERMGGL 178

Query: 180 PGELASLPVLGAAEAD--RLVHFRLFGPHGKQQEIALEPRLAIDDFVVRNAAVRAGLGFT 237
           P   A L  LGA       L +  L GP G+   + L P +  DD  +   AVRA +G  
Sbjct: 179 PALPADLAKLGAIVPSYVNLENLALKGPGGRMFPLRLAPAMRSDDTTLTLHAVRADMGIA 238

Query: 238 ALPSMFCEEELERGELVRLLPDWSLPGGYLQAVYPHRRGLLPAVRVWIDHLA 289
            +PS   EE++E G L+RLLP++      L AVY  R+ +   +R +ID L+
Sbjct: 239 YMPSWLVEEDIEGGRLLRLLPEFHSGPVTLFAVYTSRQYMSSKLRTFIDFLS 290