Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  237 bits (605), Expect = 2e-67
 Identities = 131/302 (43%), Positives = 180/302 (59%), Gaps = 4/302 (1%)

Query: 1   MQDLNDLFYFARVVEAGGFAAAGRQLGIPKSRLSRRIAELEERLGTRLLQRTTRQLKLTA 60
           MQDLND+ +FA V E GGFAAA R LGIPKSRLSRR+A+LEERLG +L+QR+TR+L LT 
Sbjct: 1   MQDLNDMVFFAEVAERGGFAAASRALGIPKSRLSRRVADLEERLGVQLMQRSTRRLSLTP 60

Query: 61  VGERYLHHCQAMLLEAEAADETVASMSSEPRGRLRVSCPVALAHAFLPDVISRFLEQYPL 120
            GE YL H  AM   A+AA E VA + +EP G +R+SCPV ++H+ L  ++  F+ +YP 
Sbjct: 61  AGEIYLRHASAMRDAAQAAAEAVAQVQTEPSGLVRLSCPVTISHSGLAQLMPVFMARYPA 120

Query: 121 VQLDMVLLNRRVDLISEGIDVALRVRDLGDEDPALVTRRLRQAQMQLVAAP---GFADHI 177
           V++DM ++NR VDLI EGID+ALRVR   ++   LV +    ++  L+A+P        +
Sbjct: 121 VRIDMRVINRPVDLIEEGIDIALRVRPEIEDSTVLVAKTFGYSRGVLIASPELLALHGPV 180

Query: 178 REPGELASLPVLG-AAEADRLVHFRLFGPHGKQQEIALEPRLAIDDFVVRNAAVRAGLGF 236
             P +L  LP    +   +    +RL GP G+    +  PR   DD          G+G 
Sbjct: 181 NTPADLVKLPTAAMSVNGEGRSDWRLEGPGGQTWVHSHIPRYVADDLATLQFGALGGVGA 240

Query: 237 TALPSMFCEEELERGELVRLLPDWSLPGGYLQAVYPHRRGLLPAVRVWIDHLAASFEACG 296
           T LP   C  +++ G LVR+LP+W         V+P RR L+PAVR  ID L    ++  
Sbjct: 241 TMLPDYMCRADVDAGRLVRVLPEWGPSPVVAHMVFPARRALVPAVRRLIDFLTEHLQSVD 300

Query: 297 ER 298
            R
Sbjct: 301 MR 302