Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 338 a.a., Site-specific tyrosine recombinase XerC from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 72/266 (27%), Positives = 119/266 (44%), Gaps = 23/266 (8%)

Query: 38  LEPGHVIALVAALRADGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPATGS 97
           ++  H+   +A L A G  P   +L ++  R        +GL+    +  +    P  G 
Sbjct: 67  VQTAHIRRWMAQLHAAGREPRGIALVLSCWRSFYRWLGHEGLVGFNPVQDVHA--PKAGK 124

Query: 98  RLPPGRNLRRSL-IRELMDVCAADPRPQGVRDAAIIALLYGTGMRKSESVDIDLDQ---- 152
            LP    +  ++ + EL D   ADP  +  RD+AI+ +LYG G+R SE   +D       
Sbjct: 125 PLPKALGVDDAVRLAELYDP-EADPWTEA-RDSAIVEMLYGCGLRVSELTGLDAQASSSA 182

Query: 153 ---VDFEARSLQVVGKGNHQLVKYAPPWAFEKLQAWLELRRQ--DLPAGAEDDPFLFNRI 207
              VD +A    V+GKG+ + +      A E ++ WL +R     L      DP    R 
Sbjct: 183 RGWVDLDAGDANVLGKGSKRRIVPMGSKASEAVRDWLAVRGDCAALATSHLRDP----RA 238

Query: 208 RRGNHITR--ARITKHAIYYIARQRGAQVGV--KIMPHDFRRAFITRVIE-EHDLSIAQK 262
                I+    R++  A++ + R+R  + G+   + PH  R +F + V++   DL   Q+
Sbjct: 239 AAALFISAKGVRMSSQAVWKLLRERSLKAGLAAPVHPHMLRHSFASHVLQSSSDLRAVQE 298

Query: 263 LAHHANIQTTAIYDRRDDNERRRAVD 288
           L  HA+I TT +Y R D     +  D
Sbjct: 299 LLGHASISTTQVYTRLDFQHLAKVYD 324